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膜蛋白的电子晶体学

Electron crystallography of membrane proteins.

作者信息

Chou Hui-Ting, Evans James E, Stahlberg Henning

机构信息

Molecular & Cellular Biology, University of California, Davis, CA, USA.

出版信息

Methods Mol Biol. 2007;369:331-43. doi: 10.1007/978-1-59745-294-6_16.

DOI:10.1007/978-1-59745-294-6_16
PMID:17656758
Abstract

Electron crystallography studies the structure of two-dimensional crystals of membrane proteins or other crystalline arrays. This method has been used to determine the atomic structures of six membrane proteins and tubulin, as well as several other structures at a slightly lower resolution, where secondary structure motifs could be identified. To preserve the high-resolution structure of 2D crystals, the meticulous sample preparation for electron crystallography is of outmost importance. Charge-induced specimen drift and lack of specimen flatness can severely affect the resolution of images for tilted samples. However, sample preparations that sandwich the two-dimensional crystals between symmetrical carbon films reduce the charge-induced specimen drift, and the flatness of the preparations can be optimized by the choice of the grid material and the preparation protocol. Data collection in the cryoelectron microscope using either the imaging or the electron diffraction mode has to be performed after low-dose procedures. Spot scanning further reduces the charge-induced specimen drift.

摘要

电子晶体学研究膜蛋白或其他晶体阵列的二维晶体结构。该方法已用于确定六种膜蛋白和微管蛋白的原子结构,以及其他几种分辨率稍低的结构,在这些结构中可以识别二级结构基序。为了保留二维晶体的高分辨率结构,电子晶体学细致的样品制备至关重要。电荷诱导的样品漂移和样品平整度不足会严重影响倾斜样品图像的分辨率。然而,将二维晶体夹在对称碳膜之间的样品制备方法可减少电荷诱导的样品漂移,并且可以通过选择网格材料和制备方案来优化制备的平整度。在低温电子显微镜中使用成像或电子衍射模式进行数据收集必须在低剂量程序之后进行。点扫描进一步减少电荷诱导的样品漂移。

相似文献

1
Electron crystallography of membrane proteins.膜蛋白的电子晶体学
Methods Mol Biol. 2007;369:331-43. doi: 10.1007/978-1-59745-294-6_16.
2
Cryo-electron microscopy of membrane proteins.膜蛋白的冷冻电子显微镜技术
Methods Mol Biol. 2014;1117:325-41. doi: 10.1007/978-1-62703-776-1_15.
3
Preparation of 2D crystals of membrane proteins for high-resolution electron crystallography data collection.用于高分辨率电子晶体学数据收集的膜蛋白二维晶体的制备。
Methods Enzymol. 2010;481:25-43. doi: 10.1016/S0076-6879(10)81001-8.
4
Merging of image data in electron crystallography.电子晶体学中图像数据的合并
Methods Mol Biol. 2013;955:195-209. doi: 10.1007/978-1-62703-176-9_11.
5
Electron crystallography of membrane proteins: two-dimensional crystallization and screening by electron microscopy.膜蛋白的电子晶体学:二维结晶及电子显微镜筛选
Methods. 2007 Apr;41(4):417-26. doi: 10.1016/j.ymeth.2006.07.011.
6
Improved specimen preparation for cryo-electron microscopy using a symmetric carbon sandwich technique.使用对称碳三明治技术改进冷冻电子显微镜的样本制备方法。
J Struct Biol. 2004 Jun;146(3):325-33. doi: 10.1016/j.jsb.2004.01.012.
7
Grid preparation for cryo-electron microscopy.用于冷冻电子显微镜的网格制备。
Methods Mol Biol. 2013;955:119-28. doi: 10.1007/978-1-62703-176-9_7.
8
Introduction to electron crystallography.电子晶体学导论。
Methods Mol Biol. 2013;955:1-16. doi: 10.1007/978-1-62703-176-9_1.
9
Carbon sandwich preparation preserves quality of two-dimensional crystals for cryo-electron microscopy.碳三明治制备法可保留二维晶体用于冷冻电子显微镜检查的质量。
Microscopy (Oxf). 2013 Dec;62(6):597-606. doi: 10.1093/jmicro/dft038. Epub 2013 Jul 23.
10
Electron crystallography for structural and functional studies of membrane proteins.用于膜蛋白结构与功能研究的电子晶体学
J Electron Microsc (Tokyo). 2011;60 Suppl 1:S149-59. doi: 10.1093/jmicro/dfr033.

引用本文的文献

1
Cryo-electron tomography: an ideal method to study membrane-associated proteins.冷冻电子断层扫描:研究膜相关蛋白的理想方法。
Philos Trans R Soc Lond B Biol Sci. 2017 Aug 5;372(1726). doi: 10.1098/rstb.2016.0210.
2
MicroED opens a new era for biological structure determination.微晶电子衍射开启了生物结构测定的新纪元。
Curr Opin Struct Biol. 2016 Oct;40:128-135. doi: 10.1016/j.sbi.2016.09.007. Epub 2016 Oct 1.
3
Femtosecond X-ray diffraction from two-dimensional protein crystals.飞秒 X 射线二维蛋白质晶体衍射。
IUCrJ. 2014 Feb 28;1(Pt 2):95-100. doi: 10.1107/S2052252514001444. eCollection 2014 Mar 1.
4
Molecular electron microscopy: state of the art and current challenges.分子电子显微镜:现状与当前挑战
ACS Chem Biol. 2008 May 16;3(5):268-81. doi: 10.1021/cb800037d.