• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酵母基因组学与药物靶点鉴定

Yeast genomics and drug target identification.

作者信息

Bharucha Nikë, Kumar Anuj

机构信息

Department of Molecular, Cellular, and Developmental Biology and the Life Sciences Institute, University of Michigan, Ann Arbor, MI 48109-2216, USA.

出版信息

Comb Chem High Throughput Screen. 2007 Sep;10(8):618-34. doi: 10.2174/138620707782507340.

DOI:10.2174/138620707782507340
PMID:18045076
Abstract

The budding yeast Saccharomyces cerevisiae is well recognized as a preferred eukaryote for the development of genomic technologies and approaches. Accordingly, a sizeable complement of genomic resources has been developed in yeast, and this genomic foundation is now informing a wide variety of disciplines. In particular, yeast genomic methodologies are gaining an expanding foothold in drug development studies, most notably as a preliminary tool towards drug target identification. In this review, we highlight many applications of yeast genomics in the identification of targeted genes and pathways of small molecules or therapeutic drugs. The applicability of genome-wide resources of yeast disruption and deletion mutants for drug-sensitivity/resistance screening is presented here, along with a summary of microarray technologies for drug-based transcriptional profiling and synthetic interaction mapping. Applications of protein-interaction traps for potential drug target identification are also considered. Collectively, this overview of yeast genomics emphasizes the growing intersection between high-throughput model organism biology and medicinal chemistry an intersection promising tangible advances for both academic and pharmaceutical fields alike.

摘要

出芽酵母酿酒酵母被公认为是开发基因组技术和方法的首选真核生物。因此,酵母中已开发出大量的基因组资源,而这一基因组基础如今正为众多学科提供信息。特别是,酵母基因组方法在药物开发研究中所占的比重越来越大,最显著的是作为识别药物靶点的初步工具。在本综述中,我们重点介绍了酵母基因组学在识别小分子或治疗药物的靶向基因和途径方面的许多应用。本文介绍了酵母破坏和缺失突变体的全基因组资源在药物敏感性/抗性筛选中的适用性,以及用于基于药物的转录谱分析和合成相互作用图谱的微阵列技术总结。还考虑了蛋白质相互作用陷阱在潜在药物靶点识别中的应用。总体而言,对酵母基因组学的这一概述强调了高通量模式生物生物学与药物化学之间日益增加的交叉点——这一交叉点有望为学术和制药领域带来切实的进展。

相似文献

1
Yeast genomics and drug target identification.酵母基因组学与药物靶点鉴定
Comb Chem High Throughput Screen. 2007 Sep;10(8):618-34. doi: 10.2174/138620707782507340.
2
Yeast on drugs: Saccharomyces cerevisiae as a tool for anticancer drug research.药物作用下的酵母:酿酒酵母作为抗癌药物研究的工具
Clin Transl Oncol. 2007 Apr;9(4):221-8. doi: 10.1007/s12094-007-0043-2.
3
[Decade of genomics--methods for genome investigation in yeast Saccharomyces cerevisiae].基因组学十年——酿酒酵母基因组研究方法
Postepy Biochem. 2006;52(4):435-47.
4
Emerging technologies in yeast genomics.酵母基因组学中的新兴技术。
Nat Rev Genet. 2001 Apr;2(4):302-12. doi: 10.1038/35066084.
5
Yeast-based functional genomics and proteomics technologies: the first 15 years and beyond.基于酵母的功能基因组学和蛋白质组学技术:头15年及以后。
Biotechniques. 2006 May;40(5):625-44. doi: 10.2144/000112151.
6
Yeast genomics and proteomics in drug discovery and target validation.药物发现与靶点验证中的酵母基因组学和蛋白质组学
Prog Cell Cycle Res. 2003;5:159-66.
7
Towards high-throughput characterization of small molecule mechanisms of action.迈向小分子作用机制的高通量表征。
Mol Biosyst. 2006 Dec;2(12):609-20. doi: 10.1039/b609384a. Epub 2006 Oct 27.
8
Off-target effects of psychoactive drugs revealed by genome-wide assays in yeast.酵母全基因组分析揭示的精神活性药物脱靶效应
PLoS Genet. 2008 Aug 8;4(8):e1000151. doi: 10.1371/journal.pgen.1000151.
9
A survey of yeast genomic assays for drug and target discovery.酵母基因组药物和靶标发现分析方法研究综述
Pharmacol Ther. 2010 Aug;127(2):156-64. doi: 10.1016/j.pharmthera.2010.04.012. Epub 2010 May 28.
10
Yeast as a model eukaryote in toxinology: a functional genomics approach to studying the molecular basis of action of pharmacologically active molecules.酵母作为毒素学中的模式真核生物:一种研究药理活性分子作用的分子基础的功能基因组学方法。
Toxicon. 2012 Sep 15;60(4):558-71. doi: 10.1016/j.toxicon.2012.03.014. Epub 2012 Mar 21.

引用本文的文献

1
Overexpression profiling reveals cellular requirements in the context of genetic backgrounds and environments.过表达谱分析揭示了遗传背景和环境背景下细胞的需求。
PLoS Genet. 2023 Apr 28;19(4):e1010732. doi: 10.1371/journal.pgen.1010732. eCollection 2023 Apr.
2
Efficient Generation of Genome-wide Libraries for Protein-ligand Screens Using Gibson Assembly.利用吉布森组装法高效构建用于蛋白质-配体筛选的全基因组文库
Bio Protoc. 2022 Nov 20;12(22). doi: 10.21769/BioProtoc.4558.
3
Cisplatin cytotoxicity is dependent on mitochondrial respiration in .顺铂的细胞毒性取决于线粒体呼吸作用。
Iran J Basic Med Sci. 2017 Jan;20(1):83-89. doi: 10.22038/ijbms.2017.8099.
4
Mutant power: using mutant allele collections for yeast functional genomics.突变体功能:利用突变体等位基因文库进行酵母功能基因组学研究
Brief Funct Genomics. 2016 Mar;15(2):75-84. doi: 10.1093/bfgp/elv042. Epub 2015 Oct 9.
5
Omics methods for probing the mode of action of natural and synthetic phytotoxins.组学方法探究天然和合成植物毒素作用模式。
J Chem Ecol. 2013 Feb;39(2):333-47. doi: 10.1007/s10886-013-0240-0. Epub 2013 Jan 27.
6
Noise reduction in genome-wide perturbation screens using linear mixed-effect models.使用线性混合效应模型降低全基因组扰动筛选中的噪声。
Bioinformatics. 2011 Aug 15;27(16):2173-80. doi: 10.1093/bioinformatics/btr359. Epub 2011 Jun 17.
7
Molecular characterization of propolis-induced cell death in Saccharomyces cerevisiae.蜂胶诱导酿酒酵母细胞死亡的分子特征
Eukaryot Cell. 2011 Mar;10(3):398-411. doi: 10.1128/EC.00256-10. Epub 2010 Dec 30.
8
Target identification using drug affinity responsive target stability (DARTS).利用药物亲和反应靶标稳定性(DARTS)进行靶标鉴定。
Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21984-9. doi: 10.1073/pnas.0910040106. Epub 2009 Dec 7.
9
Extraction of RNA from Ca-alginate-encapsulated yeast for transcriptional profiling.从海藻酸钙包封的酵母中提取RNA用于转录谱分析。
Anal Biochem. 2009 Aug 15;391(2):160-2. doi: 10.1016/j.ab.2009.04.032. Epub 2009 May 3.