Suppr超能文献

甲基丙烯酰辅酶A水合酶,细菌中两条中心碳代谢途径的一种新酶。

Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.

作者信息

Zarzycki Jan, Schlichting Ansgar, Strychalsky Nina, Müller Michael, Alber Birgit E, Fuchs Georg

机构信息

Mikrobiologie, Fakultät für Biologie, Universität Freiburg, Germany.

出版信息

J Bacteriol. 2008 Feb;190(4):1366-74. doi: 10.1128/JB.01621-07. Epub 2007 Dec 7.

Abstract

The coenzyme A (CoA)-activated C5-dicarboxylic acids mesaconyl-CoA and beta-methylmalyl-CoA play roles in two as yet not completely resolved central carbon metabolic pathways in bacteria. First, these compounds are intermediates in the 3-hydroxypropionate cycle for autotrophic CO2 fixation in Chloroflexus aurantiacus, a phototrophic green nonsulfur bacterium. Second, mesaconyl-CoA and beta-methylmalyl-CoA are intermediates in the ethylmalonyl-CoA pathway for acetate assimilation in various bacteria, e.g., in Rhodobacter sphaeroides, Methylobacterium extorquens, and Streptomyces species. In both cases, mesaconyl-CoA hydratase was postulated to catalyze the interconversion of mesaconyl-CoA and beta-methylmalyl-CoA. The putative genes coding for this enzyme in C. aurantiacus and R. sphaeroides were cloned and heterologously expressed in Escherichia coli, and the proteins were purified and studied. The recombinant homodimeric 80-kDa proteins catalyzed the reversible dehydration of erythro-beta-methylmalyl-CoA to mesaconyl-CoA with rates of 1,300 micromol min(-1) mg protein(-1). Genes coding for similar enzymes with two (R)-enoyl-CoA hydratase domains are present in the genomes of Roseiflexus, Methylobacterium, Hyphomonas, Rhodospirillum, Xanthobacter, Caulobacter, Magnetospirillum, Jannaschia, Sagittula, Parvibaculum, Stappia, Oceanicola, Loktanella, Silicibacter, Roseobacter, Roseovarius, Dinoroseobacter, Sulfitobacter, Paracoccus, and Ralstonia species. A similar yet distinct class of enzymes containing only one hydratase domain was found in various other bacteria, such as Streptomyces species. The role of this widely distributed new enzyme is discussed.

摘要

辅酶A(CoA)激活的C5 - 二羧酸中康酰辅酶A和β - 甲基苹果酰辅酶A在细菌中两条尚未完全解析的中心碳代谢途径中发挥作用。首先,这些化合物是嗜热栖热放线菌(一种光合绿色非硫细菌)中自养二氧化碳固定的3 - 羟基丙酸循环的中间体。其次,中康酰辅酶A和β - 甲基苹果酰辅酶A是各种细菌(如球形红杆菌、扭脱甲基杆菌和链霉菌属)中乙酸同化的乙基丙二酰辅酶A途径的中间体。在这两种情况下,推测中康酰辅酶A水合酶催化中康酰辅酶A和β - 甲基苹果酰辅酶A的相互转化。在嗜热栖热放线菌和球形红杆菌中编码该酶的假定基因被克隆并在大肠杆菌中进行异源表达,然后对蛋白质进行纯化和研究。重组的同型二聚体80 kDa蛋白质催化赤藓糖型β - 甲基苹果酰辅酶A可逆脱水生成中康酰辅酶A,速率为1300 μmol min⁻¹ mg蛋白质⁻¹。编码具有两个(R) - 烯酰辅酶A水合酶结构域的类似酶的基因存在于玫瑰弯菌属、甲基杆菌属、生丝单胞菌属、红螺菌属、黄色杆菌属、柄杆菌属、嗜磁螺菌属、詹氏菌属、箭形菌属、短小杆菌属、斯塔皮亚菌属、海栖菌属、洛氏菌属、硅细菌属、玫瑰杆菌属、玫瑰微球菌属、海氏玫瑰杆菌属、亚硫酸杆菌属、副球菌属和雷尔氏菌属的基因组中。在各种其他细菌(如链霉菌属)中发现了一类类似但不同的仅含有一个水合酶结构域的酶。本文讨论了这种广泛分布的新酶的作用。

相似文献

1
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
J Bacteriol. 2008 Feb;190(4):1366-74. doi: 10.1128/JB.01621-07. Epub 2007 Dec 7.
4
Identifying the missing steps of the autotrophic 3-hydroxypropionate CO2 fixation cycle in Chloroflexus aurantiacus.
Proc Natl Acad Sci U S A. 2009 Dec 15;106(50):21317-22. doi: 10.1073/pnas.0908356106. Epub 2009 Dec 2.
5
Structure of Methylobacterium extorquens malyl-CoA lyase: CoA-substrate binding correlates with domain shift.
Acta Crystallogr F Struct Biol Commun. 2017 Feb 1;73(Pt 2):79-85. doi: 10.1107/S2053230X17001029. Epub 2017 Jan 27.
6
Biotechnological potential of the ethylmalonyl-CoA pathway.
Appl Microbiol Biotechnol. 2011 Jan;89(1):17-25. doi: 10.1007/s00253-010-2873-z. Epub 2010 Sep 30.
9
Synthesis of C5-dicarboxylic acids from C2-units involving crotonyl-CoA carboxylase/reductase: the ethylmalonyl-CoA pathway.
Proc Natl Acad Sci U S A. 2007 Jun 19;104(25):10631-6. doi: 10.1073/pnas.0702791104. Epub 2007 Jun 4.
10
Crystal Structure of Mesaconyl-CoA Hydratase from CM4.
J Microbiol Biotechnol. 2023 Apr 28;33(4):485-492. doi: 10.4014/jmb.2212.12003. Epub 2023 Jan 26.

引用本文的文献

1
Exploring alternative pathways for the in vitro establishment of the HOPAC cycle for synthetic CO fixation.
Sci Adv. 2023 Jun 16;9(24):eadh4299. doi: 10.1126/sciadv.adh4299. Epub 2023 Jun 14.
2
Crystal Structure of Mesaconyl-CoA Hydratase from CM4.
J Microbiol Biotechnol. 2023 Apr 28;33(4):485-492. doi: 10.4014/jmb.2212.12003. Epub 2023 Jan 26.
3
Structural Basis for a Cork-Up Mechanism of the Intra-Molecular Mesaconyl-CoA Transferase.
Biochemistry. 2023 Jan 3;62(1):75-84. doi: 10.1021/acs.biochem.2c00532. Epub 2022 Dec 19.
6
Succinyl-CoA:Mesaconate CoA-Transferase and Mesaconyl-CoA Hydratase, Enzymes of the Methylaspartate Cycle in .
Front Microbiol. 2017 Sep 6;8:1683. doi: 10.3389/fmicb.2017.01683. eCollection 2017.
7
A synthetic pathway for the fixation of carbon dioxide in vitro.
Science. 2016 Nov 18;354(6314):900-904. doi: 10.1126/science.aah5237.
9
The divergence and natural selection of autocatalytic primordial metabolic systems.
Orig Life Evol Biosph. 2013 Jun;43(3):263-81. doi: 10.1007/s11084-013-9340-7. Epub 2013 Jul 17.
10
Comparison of Chloroflexus aurantiacus strain J-10-fl proteomes of cells grown chemoheterotrophically and photoheterotrophically.
Photosynth Res. 2012 Feb;110(3):153-68. doi: 10.1007/s11120-011-9711-8. Epub 2012 Jan 17.

本文引用的文献

2
Synthesis of C5-dicarboxylic acids from C2-units involving crotonyl-CoA carboxylase/reductase: the ethylmalonyl-CoA pathway.
Proc Natl Acad Sci U S A. 2007 Jun 19;104(25):10631-6. doi: 10.1073/pnas.0702791104. Epub 2007 Jun 4.
4
Bacterial taxa that limit sulfur flux from the ocean.
Science. 2006 Oct 27;314(5799):649-52. doi: 10.1126/science.1130657.
6
Study of an alternate glyoxylate cycle for acetate assimilation by Rhodobacter sphaeroides.
Mol Microbiol. 2006 Jul;61(2):297-309. doi: 10.1111/j.1365-2958.2006.05238.x.
7
Revisiting the glyoxylate cycle: alternate pathways for microbial acetate assimilation.
Mol Microbiol. 2006 Jul;61(2):274-6. doi: 10.1111/j.1365-2958.2006.05247.x.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验