• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

细菌视紫红质中活性核心波动的水合依赖性

Hydration dependence of active core fluctuations in bacteriorhodopsin.

作者信息

Wood Kathleen, Lehnert Ursula, Kessler Brigitte, Zaccai Giuseppe, Oesterhelt Dieter

机构信息

Institut Laue-Langevin, BP 156, F-38042 Grenoble cedex 9, France.

出版信息

Biophys J. 2008 Jul;95(1):194-202. doi: 10.1529/biophysj.107.120386. Epub 2008 Mar 13.

DOI:10.1529/biophysj.107.120386
PMID:18339747
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2426655/
Abstract

We used neutron scattering and specific hydrogen-deuterium labeling to investigate the thermal dynamics of isotope-labeled amino acids and retinal, predominantly in the active core and extracellular moiety of bacteriorhodopsin (BR) in the purple membrane and the dynamical response to hydration. Measurements on two neutron spectrometers allowed two populations of motions to be characterized. The lower amplitude motions were found to be the same for both the labeled amino acids and retinal of BR and the global membrane. The larger amplitude dynamics of the labeled part, however, were found to be more resilient than the average membrane, suggesting their functional importance. The response to hydration was characterized, showing that the labeled part of BR is not shielded from hydration effects. The results suggest that the inhibition of high-amplitude motions by lowering hydration may play a key role in the slowing down of the photocycle and the proton pumping activity of BR.

摘要

我们使用中子散射和特定的氢-氘标记来研究同位素标记的氨基酸和视黄醛的热动力学,主要针对紫色膜中细菌视紫红质(BR)的活性核心和细胞外部分以及对水合作用的动态响应。在两台中子光谱仪上进行的测量使得能够表征两种运动群体。结果发现,对于BR的标记氨基酸和视黄醛以及整体膜而言,较低幅度的运动是相同的。然而,标记部分的较大幅度动力学被发现比平均膜更具弹性,这表明它们在功能上具有重要性。对水合作用的响应得到了表征,结果表明BR的标记部分并未免受水合作用的影响。这些结果表明,通过降低水合作用来抑制高幅度运动可能在减缓BR的光循环和质子泵浦活性中起关键作用。

相似文献

1
Hydration dependence of active core fluctuations in bacteriorhodopsin.细菌视紫红质中活性核心波动的水合依赖性
Biophys J. 2008 Jul;95(1):194-202. doi: 10.1529/biophysj.107.120386. Epub 2008 Mar 13.
2
Dynamics of different functional parts of bacteriorhodopsin: H-2H labeling and neutron scattering.细菌视紫红质不同功能部分的动力学:氢-氘标记与中子散射
Proc Natl Acad Sci U S A. 1998 Apr 28;95(9):4970-5. doi: 10.1073/pnas.95.9.4970.
3
Internal molecular motions of bacteriorhodopsin: hydration-induced flexibility studied by quasielastic incoherent neutron scattering using oriented purple membranes.细菌视紫红质的内部分子运动:使用取向紫色膜通过准弹性非相干中子散射研究水合诱导的柔韧性
Proc Natl Acad Sci U S A. 1996 Jul 23;93(15):7600-5. doi: 10.1073/pnas.93.15.7600.
4
Water and bacteriorhodopsin: structure, dynamics, and function.水与细菌视紫红质:结构、动力学及功能
Biochim Biophys Acta. 2000 Aug 30;1460(1):192-203. doi: 10.1016/s0005-2728(00)00139-0.
5
Relationship between structure, dynamics and function of hydrated purple membrane investigated by neutron scattering and dielectric spectroscopy.通过中子散射和介电谱研究水合紫膜的结构、动力学与功能之间的关系。
J Mol Biol. 2007 Aug 24;371(4):914-23. doi: 10.1016/j.jmb.2007.05.092. Epub 2007 Jun 7.
6
Dynamical heterogeneity of specific amino acids in bacteriorhodopsin.细菌视紫红质中特定氨基酸的动力学异质性。
J Mol Biol. 2008 Jul 11;380(3):581-91. doi: 10.1016/j.jmb.2008.04.077. Epub 2008 May 11.
7
Moist and soft, dry and stiff: a review of neutron experiments on hydration-dynamics-activity relations in the purple membrane of Halobacterium salinarum.湿润与柔软、干燥与僵硬:嗜盐菌紫膜中水合作用-动力学-活性关系的中子实验综述
Biophys Chem. 2000 Aug 30;86(2-3):249-57. doi: 10.1016/s0301-4622(00)00172-1.
8
Deuterium solid-state NMR investigations of exchange labeled oriented purple membranes at different hydration levels.不同水合水平下交换标记取向紫色膜的氘固态核磁共振研究。
Biophys J. 2003 Jul;85(1):361-9. doi: 10.1016/S0006-3495(03)74480-4.
9
Thermal motions and function of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering.紫膜中细菌视紫红质的热运动与功能:通过中子散射研究温度和水合作用的影响
Proc Natl Acad Sci U S A. 1993 Oct 15;90(20):9668-72. doi: 10.1073/pnas.90.20.9668.
10
Function and picosecond dynamics of bacteriorhodopsin in purple membrane at different lipidation and hydration.不同脂化和水合状态下紫膜中细菌视紫红质的功能及皮秒动力学
FEBS Lett. 1998 Aug 21;433(3):321-5. doi: 10.1016/s0014-5793(98)00938-7.

引用本文的文献

1
How can we derive hydration water dynamics with incoherent neutron scattering and molecular dynamics simulation?我们如何通过非相干中子散射和分子动力学模拟来推导水合水动力学?
Biophys Physicobiol. 2019 Nov 29;16:213-219. doi: 10.2142/biophysico.16.0_213. eCollection 2019.
2
Thermodynamics of lipid multi-lamellar vesicles in presence of sterols at high hydrostatic pressure.甾醇存在下高压下的脂质多层囊泡的热力学。
Sci Rep. 2017 Nov 10;7(1):15339. doi: 10.1038/s41598-017-15582-4.
3
Solvent-Driven Dynamical Crossover in the Phenylalanine Side-Chain from the Hydrophobic Core of Amyloid Fibrils Detected by H NMR Relaxation.溶剂驱动的淀粉样纤维疏水区中苯丙氨酸侧链的动态转变:通过 H NMR 弛豫检测。
J Phys Chem B. 2017 Aug 3;121(30):7267-7275. doi: 10.1021/acs.jpcb.7b04726. Epub 2017 Jul 21.
4
The fluctuating ribosome: thermal molecular dynamics characterized by neutron scattering.动态核糖体:中子散射表征的热分子动力学。
Sci Rep. 2016 Nov 16;6:37138. doi: 10.1038/srep37138.
5
The observation of evolutionary interaction pattern pairs in membrane proteins.膜蛋白中进化相互作用模式对的观察。
BMC Struct Biol. 2015 Mar 24;15:6. doi: 10.1186/s12900-015-0033-5.
6
Zaccai neutron resilience and site-specific hydration dynamics in a globular protein.球状蛋白质中的扎卡伊中子弹性和位点特异性水合动力学。
Eur Phys J E Soft Matter. 2013 Jul;36(7):72. doi: 10.1140/epje/i2013-13072-5. Epub 2013 Jul 16.
7
From powder to solution: hydration dependence of human hemoglobin dynamics correlated to body temperature.从粉末到溶液:与体温相关的人血红蛋白动力学的水合依赖性
Biophys J. 2009 Jun 17;96(12):5073-81. doi: 10.1016/j.bpj.2009.03.043.

本文引用的文献

1
Relationship between structure, dynamics and function of hydrated purple membrane investigated by neutron scattering and dielectric spectroscopy.通过中子散射和介电谱研究水合紫膜的结构、动力学与功能之间的关系。
J Mol Biol. 2007 Aug 24;371(4):914-23. doi: 10.1016/j.jmb.2007.05.092. Epub 2007 Jun 7.
2
Structural changes in the L photointermediate of bacteriorhodopsin.细菌视紫红质的L光中间体的结构变化。
J Mol Biol. 2007 Feb 2;365(5):1379-92. doi: 10.1016/j.jmb.2006.11.016. Epub 2006 Nov 10.
3
Influence of hydration on the dynamics of lysozyme.水合作用对溶菌酶动力学的影响。
Biophys J. 2006 Oct 1;91(7):2573-88. doi: 10.1529/biophysj.106.082214. Epub 2006 Jul 14.
4
Onsets of anharmonicity in protein dynamics.蛋白质动力学中不和谐性的起始
Phys Rev Lett. 2005 Jul 15;95(3):038101. doi: 10.1103/PhysRevLett.95.038101. Epub 2005 Jul 12.
5
Proton channel hydration and dynamics of a bacteriorhodopsin triple mutant with an M-state-like conformation.具有类似M态构象的细菌视紫红质三重突变体的质子通道水化作用与动力学
Eur Biophys J. 2005 Jun;34(4):344-52. doi: 10.1007/s00249-004-0456-6. Epub 2005 Feb 2.
6
Dynamic properties of an oriented lipid/DNA complex studied by neutron scattering.通过中子散射研究的定向脂质/DNA复合物的动态特性。
Biophys J. 2005 Feb;88(2):1081-90. doi: 10.1529/biophysj.104.042788. Epub 2004 Nov 12.
7
Bacteriorhodopsin.细菌视紫红质
Annu Rev Physiol. 2004;66:665-88. doi: 10.1146/annurev.physiol.66.032102.150049.
8
Mechanism of proton transport in bacteriorhodopsin from crystallographic structures of the K, L, M1, M2, and M2' intermediates of the photocycle.基于光循环中K、L、M1、M2和M2'中间体的晶体结构探讨细菌视紫红质中质子运输的机制。
J Mol Biol. 2003 Apr 25;328(2):439-50. doi: 10.1016/s0022-2836(03)00263-8.
9
Protein dynamics studied by neutron scattering.通过中子散射研究蛋白质动力学。
Q Rev Biophys. 2002 Nov;35(4):327-67. doi: 10.1017/s0033583502003840.
10
Slaving: solvent fluctuations dominate protein dynamics and functions.从属关系:溶剂波动主导蛋白质动力学和功能。
Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):16047-51. doi: 10.1073/pnas.212637899. Epub 2002 Nov 20.