Farkas Tibor, Sestak Karol, Wei Chao, Jiang Xi
Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA.
J Virol. 2008 Jun;82(11):5408-16. doi: 10.1128/JVI.00070-08. Epub 2008 Apr 2.
In this study, we report the characterization of a novel calicivirus (CV), the Tulane virus (TV), which was isolated from stool samples of captive juvenile rhesus macaques (Macaca mulatta) of the Tulane National Primate Research Center. The complete genome of TV contains 6,714 nucleotides plus a poly(A) tail and is organized into three open reading frames (ORFs) that encode the nonstructural (NS) polyprotein (ORF1); the capsid protein (ORF2), with an estimated molecular mass of 57.9 kDa; and a possible minor structural protein (ORF3), with an isoelectric point (pI) of 10.0 and a calculated molecular mass of 22.8 kDa. The NS polyprotein revealed all typical CV amino acid motifs, including GXXGXGKT (NTPase), EYXEX (Vpg), GDCG (protease), and GLPSG and YGDD (polymerase). Phylogenetic trees constructed for the NS polyprotein, NTPase, protease, polymerase, and capsid protein sequences consistently placed the TV on a branch rooted with Norovirus, but with distances equal to those between other genera. The TV can be cultured in a monkey kidney cell line (LLC-MK2) with the appearance of typical cytopathic effect. TV exhibits a typical CV morphology, with a diameter of 36 nm, and has a buoyant density of 1.37 g/ml. According to these physicochemical and genetic characteristics, TV represents a new CV genus for which we propose the name "Recovirus" (rhesus enteric CV). Although the pathogenicity of TV in rhesus macaques remains to be elucidated, the likelihood of TV causing intestinal infection and the availability of a tissue culture system make this virus a valuable surrogate for human CVs.
在本研究中,我们报告了一种新型杯状病毒(CV)——杜兰病毒(TV)的特征,该病毒是从杜兰国家灵长类动物研究中心圈养的幼年恒河猴(猕猴)粪便样本中分离出来的。TV的完整基因组包含6714个核苷酸加上一个聚腺苷酸尾,由三个开放阅读框(ORF)组成,分别编码非结构(NS)多聚蛋白(ORF1);衣壳蛋白(ORF2),估计分子量为57.9 kDa;以及一种可能的次要结构蛋白(ORF3),其等电点(pI)为10.0,计算分子量为22.8 kDa。NS多聚蛋白显示出所有典型的杯状病毒氨基酸基序,包括GXXGXGKT(NTP酶)、EYXEX(Vpg)、GDCG(蛋白酶)以及GLPSG和YGDD(聚合酶)。根据NS多聚蛋白、NTP酶、蛋白酶聚合酶和衣壳蛋白序列构建的系统发育树一致将TV置于以诺如病毒为根的一个分支上,但与其他属之间的距离相等。TV可在猴肾细胞系(LLC-MK2)中培养,并出现典型的细胞病变效应。TV呈现典型的杯状病毒形态,直径为36 nm,浮力密度为1.37 g/ml。根据这些理化和遗传特征,TV代表了一个新的杯状病毒属,我们提议将其命名为“恒河猴肠道杯状病毒属”(Recovirus,恒河猴肠道杯状病毒)。尽管TV在恒河猴中的致病性仍有待阐明,但TV引起肠道感染的可能性以及组织培养系统的可用性使这种病毒成为人类杯状病毒的有价值替代物。