Sun Peter D, Foster Christine E, Boyington Jeffrey C
National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, Maryland, USA.
Curr Protoc Protein Sci. 2004 May;Chapter 17(1):Unit 17.1. doi: 10.1002/0471140864.ps1701s35.
This overview provides an illustrated, comprehensive survey of some commonly observed protein-fold families and structural motifs, chosen for their functional significance. It opens with descriptions and definitions of the various elements of protein structure and associated terminology. Following is an introduction into web-based structural bioinformatics that includes surveys of interactive web servers for protein fold or domain annotation, protein-structure databases, protein-structure-classification databases, structural alignments of proteins, and molecular graphics programs available for personal computers. The rest of the overview describes selected families of protein folds in terms of their secondary, tertiary, and quaternary structural arrangements, including ribbon-diagram examples, tables of representative structures with references, and brief explanations pointing out their respective biological and functional significance.
本综述对一些常见的蛋白质折叠家族和结构基序进行了图文并茂的全面概述,这些家族和基序因其功能重要性而被挑选出来。开篇介绍了蛋白质结构的各种元素及其相关术语的描述和定义。接下来是基于网络的结构生物信息学介绍,包括对用于蛋白质折叠或结构域注释的交互式网络服务器、蛋白质结构数据库、蛋白质结构分类数据库、蛋白质的结构比对以及个人计算机可用的分子图形程序的综述。综述的其余部分根据其二级、三级和四级结构排列描述了选定的蛋白质折叠家族,包括带状图示例、带有参考文献的代表性结构表格,以及指出其各自生物学和功能意义的简要解释。