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人类疾病中的串联重复序列:机制与进化

Tandem repeats in human disorders: mechanisms and evolution.

作者信息

Siwach Pratibha, Ganesh Subramaniam

机构信息

Department of Biological Sciences and Bioengineering, Indian Institute of Technology, Kanpur, India.

出版信息

Front Biosci. 2008 May 1;13:4467-84. doi: 10.2741/3017.

DOI:10.2741/3017
PMID:18508523
Abstract

One of the most compelling reasons for the study of repetitive DNA sequence in the human genome has been the instability of simple repeat sequences associating with a growing and an interesting group of disorders affecting the neurological, neuromuscular or developmental processes. As a result, the molecular processes that underlie this unique form of mutation and the pathological pathways that lead to the disorders are being uncovered rapidly and are being intensively investigated. Genes with expanded repeats exhibit either loss-of-function or gain-of-function effect at the protein and/or RNA level. In this review, we aim to provide an overview of the recent advances in molecular pathology of disorders associated with heritable changes in the length of the repeat sequences, and examine how dynamism in these repeats is regulated.

摘要

对人类基因组中的重复DNA序列进行研究的最令人信服的原因之一,是简单重复序列的不稳定性,它与影响神经、神经肌肉或发育过程的越来越多且有趣的一组疾病相关。因此,这种独特的突变形式背后的分子过程以及导致这些疾病的病理途径正在迅速被揭示,并正在得到深入研究。具有扩展重复序列的基因在蛋白质和/或RNA水平上表现出功能丧失或功能获得效应。在这篇综述中,我们旨在概述与重复序列长度的可遗传变化相关的疾病的分子病理学的最新进展,并研究这些重复序列中的动态变化是如何被调控的。

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1
Tandem repeats in human disorders: mechanisms and evolution.人类疾病中的串联重复序列:机制与进化
Front Biosci. 2008 May 1;13:4467-84. doi: 10.2741/3017.
2
Simple tandem DNA repeats and human genetic disease.简单串联DNA重复序列与人类遗传疾病。
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Evolution of simple repeats in DNA and their relation to human disease.DNA中简单重复序列的进化及其与人类疾病的关系。
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2
Proteome-scale understanding of relationship between homo-repeat enrichments and protein aggregation properties.蛋白质组范围内对同源重复富集与蛋白质聚集特性之间关系的理解。
PLoS One. 2018 Nov 6;13(11):e0206941. doi: 10.1371/journal.pone.0206941. eCollection 2018.
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J Hum Genet. 2017 Jan;62(1):105-112. doi: 10.1038/jhg.2016.91. Epub 2016 Jul 14.
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Non-random distribution of homo-repeats: links with biological functions and human diseases.同聚物重复序列的非随机分布:与生物学功能及人类疾病的联系
Sci Rep. 2016 Jun 3;6:26941. doi: 10.1038/srep26941.
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Statistical approaches to detecting and analyzing tandem repeats in genomic sequences.统计方法在基因组序列中串联重复的检测和分析。
Front Bioeng Biotechnol. 2015 Mar 17;3:31. doi: 10.3389/fbioe.2015.00031. eCollection 2015.
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HRaP: database of occurrence of HomoRepeats and patterns in proteomes.HRaP:同源重复和蛋白质组模式出现数据库。
Nucleic Acids Res. 2014 Jan;42(Database issue):D273-8. doi: 10.1093/nar/gkt927. Epub 2013 Oct 22.
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Rapid multiplexed genotyping of simple tandem repeats using capture and high-throughput sequencing.利用捕获和高通量测序技术快速多重基因分型简单串联重复。
Hum Mutat. 2013 Sep;34(9):1304-11. doi: 10.1002/humu.22359. Epub 2013 Jun 17.
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Repeat or not repeat?--Statistical validation of tandem repeat prediction in genomic sequences.重复还是不重复?——基因组序列中串联重复预测的统计验证。
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