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BIOSMILE网络搜索:一种用于注释生物医学实体和关系的网络应用程序。

BIOSMILE web search: a web application for annotating biomedical entities and relations.

作者信息

Dai Hong-Jie, Huang Chi-Hsin, Lin Ryan T K, Tsai Richard Tzong-Han, Hsu Wen-Lian

机构信息

Institute of Information Science, Academia Sinica, Department of Computer Science, National Tsing-Hua University, Hsinchu, Taiwan, R.O.C.

出版信息

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W390-8. doi: 10.1093/nar/gkn319. Epub 2008 May 31.

DOI:10.1093/nar/gkn319
PMID:18515840
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2447743/
Abstract

BIOSMILE web search (BWS), a web-based NCBI-PubMed search application, which can analyze articles for selected biomedical verbs and give users relational information, such as subject, object, location, manner, time, etc. After receiving keyword query input, BWS retrieves matching PubMed abstracts and lists them along with snippets by order of relevancy to protein-protein interaction. Users can then select articles for further analysis, and BWS will find and mark up biomedical relations in the text. The analysis results can be viewed in the abstract text or in table form. To date, BWS has been field tested by over 30 biologists and questionnaires have shown that subjects are highly satisfied with its capabilities and usability. BWS is accessible free of charge at http://bioservices.cse.yzu.edu.tw/BWS.

摘要

BIOSMILE网络搜索(BWS)是一款基于网络的NCBI - PubMed搜索应用程序,它可以分析选定生物医学动词的文章,并为用户提供诸如主语、宾语、地点、方式、时间等关系信息。在接收到关键词查询输入后,BWS检索匹配的PubMed摘要,并按与蛋白质 - 蛋白质相互作用的相关性顺序列出这些摘要及片段。然后,用户可以选择文章进行进一步分析,BWS会在文本中找到并标记生物医学关系。分析结果可以在摘要文本中查看或以表格形式查看。到目前为止,BWS已经经过30多位生物学家的实地测试,问卷调查显示受试者对其功能和可用性高度满意。可通过http://bioservices.cse.yzu.edu.tw/BWS免费访问BWS。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/5e004272cc69/gkn319f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/7c0f0845ae32/gkn319f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/c9bef6d216d4/gkn319f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/70587a2d09cf/gkn319f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/98e4b1740c18/gkn319f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/90d392f05c66/gkn319f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/2764f8460fa0/gkn319f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/5e004272cc69/gkn319f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/7c0f0845ae32/gkn319f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/c9bef6d216d4/gkn319f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/70587a2d09cf/gkn319f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/98e4b1740c18/gkn319f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/90d392f05c66/gkn319f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/2764f8460fa0/gkn319f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31f7/2447743/5e004272cc69/gkn319f7.jpg

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