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可视化完整细胞中的染色质动态变化。

Visualizing chromatin dynamics in intact cells.

作者信息

Voss Ty C, Hager Gordon L

机构信息

Laboratory of Receptor Biology and Gene Expression, Building 41, B602, 41 Library Drive, National Cancer Institute, NIH Bethesda, MD 20892-5055, USA.

出版信息

Biochim Biophys Acta. 2008 Nov;1783(11):2044-51. doi: 10.1016/j.bbamcr.2008.06.022. Epub 2008 Jul 16.

DOI:10.1016/j.bbamcr.2008.06.022
PMID:18675855
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6319355/
Abstract

Chromatin and associated regulatory proteins regulate gene expression in the natural environment of the intact cell nucleus. Specific combinations of DNA-binding transcription factors and recruited coregulatory proteins alter the conformation of chromatin at promoters and enhancers of target genes to stimulate or repress transcription. The dynamic nature of the regulatory proteins active in these processes allows the cell to modulate gene expression very rapidly, an important feature in many physiological processes. Live cell imaging and photobleaching studies of fluorescently-tagged proteins reveal that many transcription factors and other chromatin-associated proteins rapidly move through the nucleoplasm. Transcription factors also transiently interact with specific regulatory sequences in chromatin, suggesting that gene activation does not require the formation of stable long-lived regulatory complexes on the chromatin. In this review we discuss how dynamic interactions allow transcriptional regulatory proteins find their targets within the nucleus, alter target chromatin structure, and modulate physiological gene expression.

摘要

染色质及相关调控蛋白在完整细胞核的自然环境中调节基因表达。DNA结合转录因子与募集的共调控蛋白的特定组合改变了靶基因启动子和增强子处染色质的构象,从而刺激或抑制转录。参与这些过程的调控蛋白的动态性质使细胞能够非常迅速地调节基因表达,这是许多生理过程中的一个重要特征。对荧光标记蛋白的活细胞成像和光漂白研究表明,许多转录因子和其他染色质相关蛋白在核质中快速移动。转录因子还与染色质中的特定调控序列瞬时相互作用,这表明基因激活并不需要在染色质上形成稳定的长寿调控复合物。在本综述中,我们讨论了动态相互作用如何使转录调控蛋白在细胞核内找到其靶标、改变靶标染色质结构并调节生理基因表达。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/b13faead455e/nihms-1003026-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/2906ed743a2f/nihms-1003026-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/c16774dbb17a/nihms-1003026-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/b13faead455e/nihms-1003026-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/2906ed743a2f/nihms-1003026-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/c16774dbb17a/nihms-1003026-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1d0/6319355/b13faead455e/nihms-1003026-f0003.jpg

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本文引用的文献

1
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Biophys J. 2008 Jul;95(1):L01-3. doi: 10.1529/biophysj.108.134122. Epub 2008 Apr 18.
2
Chromatin dynamics and gene positioning.染色质动力学与基因定位
Cell. 2008 Mar 21;132(6):929-34. doi: 10.1016/j.cell.2008.03.004.
3
Interaction of the glucocorticoid receptor with the chromatin landscape.糖皮质激素受体与染色质景观的相互作用。
甲醛交联:一种用于研究染色质复合物的工具。
J Biol Chem. 2015 Oct 30;290(44):26404-11. doi: 10.1074/jbc.R115.651679. Epub 2015 Sep 9.
4
Histone exchange, chromatin structure and the regulation of transcription.组蛋白交换、染色质结构和转录调控。
Nat Rev Mol Cell Biol. 2015 Mar;16(3):178-89. doi: 10.1038/nrm3941. Epub 2015 Feb 4.
5
The three Rs of transcription: recruit, retain, and recycle.转录的三个 R:招募、保留和再循环。
Mol Cell. 2010 Dec 22;40(6):855-8. doi: 10.1016/j.molcel.2010.12.010.
6
The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules.α-珠蛋白基因结构域的三维折叠揭示染色质小球的形成。
Nat Struct Mol Biol. 2011 Jan;18(1):107-14. doi: 10.1038/nsmb.1936. Epub 2010 Dec 5.
7
Capturing the dynamic epigenome.捕获动态的表观基因组。
Genome Biol. 2010;11(10):218. doi: 10.1186/gb-2010-11-10-218. Epub 2010 Oct 8.
8
Live cell imaging and systems biology.活细胞成像和系统生物学。
Wiley Interdiscip Rev Syst Biol Med. 2011 Mar-Apr;3(2):167-82. doi: 10.1002/wsbm.108. Epub 2010 Aug 20.
9
High nucleosome occupancy is encoded at human regulatory sequences.高核小体占有率被编码在人类调控序列中。
PLoS One. 2010 Feb 9;5(2):e9129. doi: 10.1371/journal.pone.0009129.
10
Epigenetic modifications in 3D: nuclear organization of the differentiating mammary epithelial cell.3D 中的表观遗传修饰:分化的乳腺上皮细胞的核组织。
J Mammary Gland Biol Neoplasia. 2010 Mar;15(1):73-83. doi: 10.1007/s10911-010-9169-x. Epub 2010 Feb 10.
Mol Cell. 2008 Mar 14;29(5):611-24. doi: 10.1016/j.molcel.2008.02.010.
4
Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter.转录激活因子在内源启动子处同时进行快速和慢速循环。
Science. 2008 Jan 25;319(5862):466-9. doi: 10.1126/science.1150559.
5
Evidence for a common mode of transcription factor interaction with chromatin as revealed by improved quantitative fluorescence recovery after photobleaching.光漂白后改进的定量荧光恢复所揭示的转录因子与染色质相互作用的共同模式的证据。
Biophys J. 2008 Apr 15;94(8):3323-39. doi: 10.1529/biophysj.107.123182. Epub 2008 Jan 16.
6
Probing the interior of living cells with fluorescence correlation spectroscopy.用荧光相关光谱法探测活细胞内部
Ann N Y Acad Sci. 2008;1130:21-7. doi: 10.1196/annals.1430.002. Epub 2007 Dec 20.
7
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8
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Science. 2007 May 25;316(5828):1191-4. doi: 10.1126/science.1141967.
9
Nuclear organization of the genome and the potential for gene regulation.基因组的核组织与基因调控潜力。
Nature. 2007 May 24;447(7143):413-7. doi: 10.1038/nature05916.
10
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Cell. 2007 Feb 23;128(4):707-19. doi: 10.1016/j.cell.2007.01.015.