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Transcription dynamics.
Mol Cell. 2009 Sep 24;35(6):741-53. doi: 10.1016/j.molcel.2009.09.005.
2
[Structural biology of transcription on eukaryotic chromatin].
Tanpakushitsu Kakusan Koso. 2005 Aug;50(10 Suppl):1247-63.
3
Increase in initiation sites for chromatin directed RNA synthesis by acetylation of chromosomal proteins.
Biochem Biophys Res Commun. 1978 Sep 14;84(1):110-6. doi: 10.1016/0006-291x(78)90270-x.
5
CHD chromatin remodelers and the transcription cycle.
Transcription. 2011 Nov-Dec;2(6):244-53. doi: 10.4161/trns.2.6.17840. Epub 2011 Nov 1.
7
Visualizing chromatin dynamics in intact cells.
Biochim Biophys Acta. 2008 Nov;1783(11):2044-51. doi: 10.1016/j.bbamcr.2008.06.022. Epub 2008 Jul 16.
9
Individual transcription factors modulate both the micromovement of chromatin and its long-range structure.
Proc Natl Acad Sci U S A. 2024 Apr 30;121(18):e2311374121. doi: 10.1073/pnas.2311374121. Epub 2024 Apr 22.
10
Changing the DNA landscape: putting a SPN on chromatin.
Curr Top Microbiol Immunol. 2003;274:171-201. doi: 10.1007/978-3-642-55747-7_7.

引用本文的文献

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The ISW1 and CHD1 chromatin remodelers suppress global nucleosome dynamics in living yeast cells.
Sci Adv. 2025 Aug;11(31):eadw7108. doi: 10.1126/sciadv.adw7108. Epub 2025 Aug 1.
2
Quantifying Transcription Factor Enrichment at Target Loci in Live Embryos.
Methods Mol Biol. 2025;2923:119-141. doi: 10.1007/978-1-0716-4522-2_8.
3
Emerging roles of transcriptional condensates as temporal signal integrators.
Nat Rev Genet. 2025 Apr 16. doi: 10.1038/s41576-025-00837-y.
5
From homogeneity to heterogeneity: Refining stochastic simulations of gene regulation.
Comput Struct Biotechnol J. 2025 Jan 15;27:411-422. doi: 10.1016/j.csbj.2025.01.004. eCollection 2025.
7
A simple MiMIC-based approach for tagging endogenous genes to visualise live transcription in Drosophila.
Development. 2024 Dec 15;151(24). doi: 10.1242/dev.204294. Epub 2024 Dec 16.
8
Crosstalk between paralogs and isoforms influences p63-dependent regulatory element activity.
Nucleic Acids Res. 2024 Dec 11;52(22):13812-13831. doi: 10.1093/nar/gkae1143.
10
Protocol for single-molecule imaging of transcription and epigenetic factors in human neural stem cell-derived neurons.
STAR Protoc. 2024 Dec 20;5(4):103432. doi: 10.1016/j.xpro.2024.103432. Epub 2024 Nov 1.

本文引用的文献

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Sustained oscillations of NF-kappaB produce distinct genome scanning and gene expression profiles.
PLoS One. 2009 Sep 29;4(9):e7163. doi: 10.1371/journal.pone.0007163.
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Ultradian hormone stimulation induces glucocorticoid receptor-mediated pulses of gene transcription.
Nat Cell Biol. 2009 Sep;11(9):1093-102. doi: 10.1038/ncb1922. Epub 2009 Aug 16.
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Chd1 regulates open chromatin and pluripotency of embryonic stem cells.
Nature. 2009 Aug 13;460(7257):863-8. doi: 10.1038/nature08212. Epub 2009 Jul 8.
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Imaging transcription in living cells.
Annu Rev Biophys. 2009;38:173-96. doi: 10.1146/annurev.biophys.050708.133728.
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Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.
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Kinetic complexity of the global response to glucocorticoid receptor action.
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Combinatorial probabilistic chromatin interactions produce transcriptional heterogeneity.
J Cell Sci. 2009 Feb 1;122(Pt 3):345-56. doi: 10.1242/jcs.035865. Epub 2009 Jan 6.
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Glucocorticoid receptor activation of the Ciz1-Lcn2 locus by long range interactions.
J Biol Chem. 2009 Mar 6;284(10):6048-52. doi: 10.1074/jbc.C800212200. Epub 2009 Jan 5.
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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters.
Science. 2008 Dec 19;322(5909):1845-8. doi: 10.1126/science.1162228. Epub 2008 Dec 4.
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Single-RNA counting reveals alternative modes of gene expression in yeast.
Nat Struct Mol Biol. 2008 Dec;15(12):1263-71. doi: 10.1038/nsmb.1514. Epub 2008 Nov 16.

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