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玄武岩希瓦氏菌新种,一种从黑砂中分离出的海洋细菌。

Shewanella basaltis sp. nov., a marine bacterium isolated from black sand.

作者信息

Chang Ho-Won, Roh Seong Woon, Kim Kyoung-Ho, Nam Young-Do, Jeon Che Ok, Oh Hee-Mock, Bae Jin-Woo

机构信息

Biological Resources Center, KRIBB, Daejeon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2008 Aug;58(Pt 8):1907-10. doi: 10.1099/ijs.0.65725-0.

Abstract

A Gram-negative, motile, rod-shaped bacterium was isolated from black sand collected at Soesoggak, Jeju island, Korea. The strain, designated J83T, was able to grow in the presence of 5 % NaCl, at temperatures of 4-45 degrees C and over the pH range 5.5-9.5. The isolate reduced nitrate to nitrite and was positive for oxidase, catalase, alkaline phosphatase and leucine arylamidase. Strain J83(T) utilized malate, maltose, mannitol and glucose as sole sources of carbon. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain J83T belongs to the class Gammaproteobacteria and is related to species of the genus Shewanella. Strain J83T exhibited 97.8 % 16S rRNA gene sequence similarity to the type strain of Shewanella hafniensis. Based on DNA-DNA hybridization, the level of relatedness between strain J83T and S. hafniensis NBRC 100975T was 39.3 %. On the basis of phenotypic, genetic and phylogenetic data, strain J83T is considered to represent a novel species of the genus Shewanella, for which the name Shewanella basaltis sp. nov. is proposed. The type strain is J83T (=KCTC 22121T =JCM 14937T).

摘要

从韩国济州岛苏索加克采集的黑砂中分离出一株革兰氏阴性、具运动性、杆状的细菌。该菌株命名为J83T,能够在5%氯化钠存在的条件下、4-45℃的温度范围内以及pH值5.5-9.5的环境中生长。该分离株可将硝酸盐还原为亚硝酸盐,氧化酶、过氧化氢酶、碱性磷酸酶和亮氨酸芳基酰胺酶检测呈阳性。菌株J83(T)利用苹果酸、麦芽糖、甘露醇和葡萄糖作为唯一碳源。基于16S rRNA基因序列的系统发育分析表明,菌株J83T属于γ-变形菌纲,与希瓦氏菌属的物种相关。菌株J83T与哈氏希瓦氏菌模式菌株的16S rRNA基因序列相似性为97.8%。基于DNA-DNA杂交分析,菌株J83T与哈氏希瓦氏菌NBRC 100975T的亲缘关系水平为39.3%。基于表型、遗传和系统发育数据,菌株J83T被认为代表希瓦氏菌属的一个新物种,为此提出新名称玄武岩希瓦氏菌(Shewanella basaltis sp. nov.)。模式菌株为J83T(=KCTC 22121T =JCM 14937T)。

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