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在鸡α-珠蛋白基因结构域一个1.7千碱基对长的DNA片段中,序列特异性蛋白质结合位点的存在与复制活性和基质结合相关。

The presence of sequence-specific protein binding sites correlate with replication activity and matrix binding in a 1.7 Kb-long DNA fragment of the chicken alpha-globin gene domain.

作者信息

de Moura Gallo C V, Vassetzky Y S, Targa F R, Georgiev G P, Scherrer K, Razin S V

机构信息

Institut Jacques Monod, Université Paris, France.

出版信息

Biochem Biophys Res Commun. 1991 Aug 30;179(1):512-9. doi: 10.1016/0006-291x(91)91401-w.

DOI:10.1016/0006-291x(91)91401-w
PMID:1883377
Abstract

Several recognition sites for novel sequence-specific DNA-binding proteins were found at the 5'-side of the chicken alpha-globin gene domain in a 1.7 Kbp DNA fragment. This fragment includes the replication origin, a non tissue-specific transcriptional enhancer, a DNAse I hypersensitive site and a permanent site of DNA attachment to the nuclear matrix. Most of the identified protein binding sites differ from previously known consensus sequences. Two sites coincide with MARs located at the 5'-end of the 1.7 kbp fragment. The proteins interacting with these two recognition sites were observed only in proliferating cells and were virtually absent in the extracts obtained from the nonreplicating differentiated form of the same cells. One of them seems to belong to the GATA protein family, but its presence in nuclear extracts correlates with cell proliferation rather than expression of the domain.

摘要

在一个1.7千碱基对(kbp)的DNA片段中,鸡α-珠蛋白基因结构域的5'端发现了几个新型序列特异性DNA结合蛋白的识别位点。该片段包括复制起点、一个非组织特异性转录增强子、一个DNA酶I超敏位点以及DNA与核基质附着的永久位点。大多数已鉴定的蛋白质结合位点与先前已知的共有序列不同。两个位点与位于1.7 kbp片段5'端的基质附着区域(MARs)重合。仅在增殖细胞中观察到与这两个识别位点相互作用的蛋白质,而在从相同细胞的非复制分化形式获得的提取物中几乎不存在。其中一个似乎属于GATA蛋白家族,但其在核提取物中的存在与细胞增殖相关,而非该结构域的表达。

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1
The presence of sequence-specific protein binding sites correlate with replication activity and matrix binding in a 1.7 Kb-long DNA fragment of the chicken alpha-globin gene domain.在鸡α-珠蛋白基因结构域一个1.7千碱基对长的DNA片段中,序列特异性蛋白质结合位点的存在与复制活性和基质结合相关。
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引用本文的文献

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A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain.位于差异甲基化区域的一个依赖CTCF的沉默子可能调控一个与组织特异性基因结构域重叠的管家基因的表达。
Mol Cell Biol. 2006 Mar;26(5):1589-97. doi: 10.1128/MCB.26.5.1589-1597.2006.
2
The sequence-specific nuclear matrix binding factor F6 is a chicken GATA-like protein.序列特异性核基质结合因子F6是一种鸡源GATA样蛋白。
Mol Gen Genet. 1993 Apr;238(3):309-14. doi: 10.1007/BF00291988.
3
Excision close to matrix attachment regions of the entire chicken alpha-globin gene domain by nuclease S1 and characterization of the framing structures.
用核酸酶S1切除整个鸡α-珠蛋白基因结构域靠近基质附着区域的片段并对构架结构进行表征。
Proc Natl Acad Sci U S A. 1994 May 10;91(10):4422-6. doi: 10.1073/pnas.91.10.4422.
4
Characterization of the chromatin structure in the upstream region of the chicken alpha-globin gene domain.鸡α-珠蛋白基因结构域上游区域染色质结构的表征
Mol Gen Genet. 1994 Mar;242(6):649-52. doi: 10.1007/BF00283418.
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Organization of specific DNA sequence elements in the region of the replication origin and matrix attachment site in the chicken alpha-globin gene domain.鸡α-珠蛋白基因结构域中复制起点和基质附着位点区域特定DNA序列元件的组织方式。
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