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一种哺乳动物的色氨酰 - tRNA合成酶与原核生物合成酶几乎没有同源性,但与哺乳动物肽链释放因子近乎相同。

A mammalian tryptophanyl-tRNA synthetase shows little homology to prokaryotic synthetases but near identity with mammalian peptide chain release factor.

作者信息

Garret M, Pajot B, Trézéguet V, Labouesse J, Merle M, Gandar J C, Benedetto J P, Sallafranque M L, Alterio J, Gueguen M

机构信息

Institut de Biochimie Cellulaire et Neurochimie du CNRS, Université de Bordeaux II, France.

出版信息

Biochemistry. 1991 Aug 6;30(31):7809-17. doi: 10.1021/bi00245a021.

DOI:10.1021/bi00245a021
PMID:1907847
Abstract

Determination of the amino acid sequence of beef pancreas tryptophanyl-tRNA synthetase was undertaken through both cDNA and direct peptide sequencing. A full-length cDNA clone containing a 475 amino acid open reading frame was obtained. The molecular mass of the corresponding peptide chain, 53,728 Da, was in agreement with that of beef tryptophanyl-tRNA synthetase, as determined by physicochemical methods (54 kDa). Expression of this clone in Escherichia coli led to tryptophanyl-tRNA synthetase activity in cell extracts. The open reading frame included two sequences analogous to the consensus sequences, HIGH and KMSKS, found in class I aminoacyl-tRNA synthetases. The homology with prokaryotic and yeast mitochondrial tryptophanyl-tRNA synthetases was low and was limited to the regions of the consensus sequences. However, a 90% homology was observed with the recently described rabbit peptide chain release factor (eRF) [Lee et al. (1990) Proc. Natl. Acad. Sci. 87, 3508-3512]. Such a strong homology may reveal a new group of genes deriving from a common ancestor, the products of which could be involved in tRNA aminoacylation (tryptophanyl-tRNA synthetase) or translation termination (eRF).

摘要

通过cDNA和直接肽测序对牛胰腺色氨酰 - tRNA合成酶的氨基酸序列进行了测定。获得了一个包含475个氨基酸开放阅读框的全长cDNA克隆。通过物理化学方法测定,相应肽链的分子量为53,728 Da,与牛色氨酰 - tRNA合成酶的分子量(54 kDa)一致。该克隆在大肠杆菌中的表达导致细胞提取物中出现色氨酰 - tRNA合成酶活性。开放阅读框包含两个与I类氨酰 - tRNA合成酶中发现的共有序列HIGH和KMSKS类似的序列。与原核生物和酵母线粒体色氨酰 - tRNA合成酶的同源性较低,且仅限于共有序列区域。然而,与最近描述的兔肽链释放因子(eRF)[Lee等人(1990年)《美国国家科学院院刊》87, 3508 - 3512]观察到90%的同源性。如此高的同源性可能揭示了一组源自共同祖先的新基因,其产物可能参与tRNA氨酰化(色氨酰 - tRNA合成酶)或翻译终止(eRF)。

相似文献

1
A mammalian tryptophanyl-tRNA synthetase shows little homology to prokaryotic synthetases but near identity with mammalian peptide chain release factor.一种哺乳动物的色氨酰 - tRNA合成酶与原核生物合成酶几乎没有同源性,但与哺乳动物肽链释放因子近乎相同。
Biochemistry. 1991 Aug 6;30(31):7809-17. doi: 10.1021/bi00245a021.
2
Human interferon gamma potently induces the synthesis of a 55-kDa protein (gamma 2) highly homologous to rabbit peptide chain release factor and bovine tryptophanyl-tRNA synthetase.人γ干扰素能有效诱导一种55 kDa蛋白(γ2)的合成,该蛋白与兔肽链释放因子和牛色氨酰-tRNA合成酶高度同源。
Proc Natl Acad Sci U S A. 1991 Dec 15;88(24):11520-4. doi: 10.1073/pnas.88.24.11520.
3
Cloning and expression of a mammalian peptide chain release factor with sequence similarity to tryptophanyl-tRNA synthetases.一种与色氨酰 - tRNA合成酶具有序列相似性的哺乳动物肽链释放因子的克隆与表达。
Proc Natl Acad Sci U S A. 1990 May;87(9):3508-12. doi: 10.1073/pnas.87.9.3508.
4
Escherichia coli tryptophanyl-tRNA synthetase mutants selected for tryptophan auxotrophy implicate the dimer interface in optimizing amino acid binding.为色氨酸营养缺陷型筛选出的大肠杆菌色氨酰 - tRNA合成酶突变体表明二聚体界面在优化氨基酸结合方面发挥作用。
Biochemistry. 1996 Jan 9;35(1):32-40. doi: 10.1021/bi952103d.
5
Cloning and nucleotide sequence of the structural gene encoding for human tryptophanyl-tRNA synthetase.编码人色氨酰 - tRNA合成酶的结构基因的克隆与核苷酸序列分析
Gene. 1991 Dec 30;109(2):291-6. doi: 10.1016/0378-1119(91)90624-k.
6
Identification and expression of the Saccharomyces cerevisiae cytoplasmic tryptophanyl-tRNA synthetase gene.酿酒酵母细胞质色氨酰 - tRNA合成酶基因的鉴定与表达。
Yeast. 1997 Jan;13(1):37-41. doi: 10.1002/(SICI)1097-0061(199701)13:1<37::AID-YEA55>3.0.CO;2-L.
7
Immunochemical studies of beef pancreas tryptophanyl-tRNA synthetase and its fragments. Determination of the number of antigenic determinants and a comparison with tryptophanyl- tRNA synthetases from other sources and with reverse transcriptase from avian myeloblastosis virus.
Eur J Biochem. 1979 Jul;97(2):529-40. doi: 10.1111/j.1432-1033.1979.tb13141.x.
8
Mammalian polypeptide chain release factor and tryptophanyl-tRNA synthetase are distinct proteins.哺乳动物多肽链释放因子和色氨酰-tRNA合成酶是不同的蛋白质。
EMBO J. 1993 Oct;12(10):4013-9. doi: 10.1002/j.1460-2075.1993.tb06079.x.
9
Mammalian tryptophanyl-tRNA synthetases.哺乳动物色氨酰-tRNA合成酶
Biochimie. 1993;75(12):1027-39. doi: 10.1016/0300-9084(93)90002-a.
10
Cloning and nucleotide sequence of the structural gene coding for Bacillus subtilis tryptophanyl-tRNA synthetase.枯草芽孢杆菌色氨酰 - tRNA合成酶结构基因的克隆及核苷酸序列
Gene. 1988 Dec 20;73(2):537-43. doi: 10.1016/0378-1119(88)90518-5.

引用本文的文献

1
Genetic code in evolution: switching species-specific aminoacylation with a peptide transplant.进化中的遗传密码:通过肽移植切换物种特异性氨酰化作用
EMBO J. 1998 Jan 2;17(1):297-305. doi: 10.1093/emboj/17.1.297.
2
Interaction between human tRNA synthetases involves repeated sequence elements.人类tRNA合成酶之间的相互作用涉及重复序列元件。
Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10128-33. doi: 10.1073/pnas.93.19.10128.
3
Localization of the tryptophanyl tRNA synthetase gene (WARS) on human and bovine chromosomes by in situ hybridization.
通过原位杂交将色氨酰tRNA合成酶基因(WARS)定位在人和牛的染色体上。
Mamm Genome. 1993;4(3):183-4. doi: 10.1007/BF00352236.
4
Mammalian polypeptide chain release factor and tryptophanyl-tRNA synthetase are distinct proteins.哺乳动物多肽链释放因子和色氨酰-tRNA合成酶是不同的蛋白质。
EMBO J. 1993 Oct;12(10):4013-9. doi: 10.1002/j.1460-2075.1993.tb06079.x.
5
The "eRF" clone corresponds to tryptophanyl-tRNA synthetase, not mammalian release factor.“eRF”克隆对应色氨酰 - tRNA合成酶,而非哺乳动物释放因子。
Proc Natl Acad Sci U S A. 1994 Mar 29;91(7):2777-80. doi: 10.1073/pnas.91.7.2777.
6
New nucleotide sequence data on the EMBL File Server.欧洲分子生物学实验室文件服务器上的新核苷酸序列数据。
Nucleic Acids Res. 1991 Dec 25;19(24):6985-99. doi: 10.1093/nar/19.24.6985.
7
Identity determinants of E. coli tryptophan tRNA.大肠杆菌色氨酸tRNA的身份决定因素。
Nucleic Acids Res. 1991 Dec 11;19(23):6379-82. doi: 10.1093/nar/19.23.6379.
8
Mechanism and regulation of eukaryotic protein synthesis.真核生物蛋白质合成的机制与调控
Microbiol Rev. 1992 Jun;56(2):291-315. doi: 10.1128/mr.56.2.291-315.1992.
9
Human histidyl-tRNA synthetase: recognition of amino acid signature regions in class 2a aminoacyl-tRNA synthetases.人组氨酰-tRNA合成酶:2a类氨酰-tRNA合成酶中氨基酸特征区域的识别
Nucleic Acids Res. 1992 Mar 11;20(5):1075-81. doi: 10.1093/nar/20.5.1075.
10
The yeast nuclear gene MRF1 encodes a mitochondrial peptide chain release factor and cures several mitochondrial RNA splicing defects.酵母核基因MRF1编码一种线粒体肽链释放因子,并可纠正多种线粒体RNA剪接缺陷。
Nucleic Acids Res. 1992 Dec 11;20(23):6339-46. doi: 10.1093/nar/20.23.6339.