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一种与色氨酰 - tRNA合成酶具有序列相似性的哺乳动物肽链释放因子的克隆与表达。

Cloning and expression of a mammalian peptide chain release factor with sequence similarity to tryptophanyl-tRNA synthetases.

作者信息

Lee C C, Craigen W J, Muzny D M, Harlow E, Caskey C T

机构信息

Institute for Molecular Genetics, Baylor College of Medicine, Houston, TX 77030.

出版信息

Proc Natl Acad Sci U S A. 1990 May;87(9):3508-12. doi: 10.1073/pnas.87.9.3508.

DOI:10.1073/pnas.87.9.3508
PMID:2185472
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC53930/
Abstract

The termination of protein synthesis is encoded by in-frame nonsense (stop) codons. Most organisms use three nonsense codons: UGA, UAG, and UAA. In contrast to sense codons, which are decoded by specific tRNAs, nonsense codons are decoded by proteins called release factors (RFs). Here we report the cloning of a mammalian RF cDNA by the use of monoclonal antibodies specific for rabbit RF. Functional studies showed that, when expressed in Escherichia coli, the protein encoded by this cDNA has in vitro biochemical characteristics similar to those of previously characterized mammalian RFs. DNA sequencing of this eukaryotic RF cDNA revealed a remarkable sequence similarity to bacterial and mitochondrial tryptophanyl-tRNA synthetases, with the greatest similarity confined to the synthetase active site, and no obvious similarity to bacterial RFs.

摘要

蛋白质合成的终止由读框内的无义(终止)密码子编码。大多数生物体使用三个无义密码子:UGA、UAG和UAA。与由特定tRNA解码的有义密码子不同,无义密码子由称为释放因子(RF)的蛋白质解码。在此,我们报告通过使用针对兔RF的单克隆抗体克隆了一个哺乳动物RF cDNA。功能研究表明,当在大肠杆菌中表达时,该cDNA编码的蛋白质具有与先前表征的哺乳动物RF相似的体外生化特性。对该真核RF cDNA的DNA测序揭示了与细菌和线粒体色氨酰-tRNA合成酶具有显著的序列相似性,最大相似性局限于合成酶活性位点,并且与细菌RF没有明显的相似性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/e1615388f98c/pnas01034-0264-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/cfa2d1d99d3d/pnas01034-0263-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/f2b921dd7215/pnas01034-0263-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/e1615388f98c/pnas01034-0264-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/cfa2d1d99d3d/pnas01034-0263-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/f2b921dd7215/pnas01034-0263-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/256a/53930/e1615388f98c/pnas01034-0264-a.jpg

相似文献

1
Cloning and expression of a mammalian peptide chain release factor with sequence similarity to tryptophanyl-tRNA synthetases.一种与色氨酰 - tRNA合成酶具有序列相似性的哺乳动物肽链释放因子的克隆与表达。
Proc Natl Acad Sci U S A. 1990 May;87(9):3508-12. doi: 10.1073/pnas.87.9.3508.
2
A mammalian tryptophanyl-tRNA synthetase shows little homology to prokaryotic synthetases but near identity with mammalian peptide chain release factor.一种哺乳动物的色氨酰 - tRNA合成酶与原核生物合成酶几乎没有同源性,但与哺乳动物肽链释放因子近乎相同。
Biochemistry. 1991 Aug 6;30(31):7809-17. doi: 10.1021/bi00245a021.
3
Human interferon gamma potently induces the synthesis of a 55-kDa protein (gamma 2) highly homologous to rabbit peptide chain release factor and bovine tryptophanyl-tRNA synthetase.人γ干扰素能有效诱导一种55 kDa蛋白(γ2)的合成,该蛋白与兔肽链释放因子和牛色氨酰-tRNA合成酶高度同源。
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Mammalian polypeptide chain release factor and tryptophanyl-tRNA synthetase are distinct proteins.哺乳动物多肽链释放因子和色氨酰-tRNA合成酶是不同的蛋白质。
EMBO J. 1993 Oct;12(10):4013-9. doi: 10.1002/j.1460-2075.1993.tb06079.x.
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MSW, a yeast gene coding for mitochondrial tryptophanyl-tRNA synthetase.MSW,一个编码线粒体色氨酰-tRNA合成酶的酵母基因。
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Cloning and complete nucleotide sequence of the Bacillus stearothermophilus tryptophanyl tRNA synthetase gene.嗜热脂肪芽孢杆菌色氨酰-tRNA合成酶基因的克隆及全核苷酸序列分析
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Are the tryptophanyl-tRNA synthetase and the peptide-chain-release factor from higher eukaryotes one and the same protein?高等真核生物中的色氨酰 - tRNA合成酶和肽链释放因子是同一种蛋白质吗?
Eur J Biochem. 1993 Mar 1;212(2):457-66. doi: 10.1111/j.1432-1033.1993.tb17682.x.

引用本文的文献

1
Interaction between human tRNA synthetases involves repeated sequence elements.人类tRNA合成酶之间的相互作用涉及重复序列元件。
Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10128-33. doi: 10.1073/pnas.93.19.10128.
2
Mammalian polypeptide chain release factor and tryptophanyl-tRNA synthetase are distinct proteins.哺乳动物多肽链释放因子和色氨酰-tRNA合成酶是不同的蛋白质。
EMBO J. 1993 Oct;12(10):4013-9. doi: 10.1002/j.1460-2075.1993.tb06079.x.
3
The "eRF" clone corresponds to tryptophanyl-tRNA synthetase, not mammalian release factor.

本文引用的文献

1
Dramatic events in ciliate evolution: alteration of UAA and UAG termination codons to glutamine codons due to anticodon mutations in two Tetrahymena tRNAs.纤毛生物进化中的戏剧性事件:由于两种四膜虫 tRNA 的反密码子突变,UAA 和 UAG 终止密码子改变为谷氨酰胺密码子。
EMBO J. 1986 Jun;5(6):1307-11. doi: 10.1002/j.1460-2075.1986.tb04360.x.
2
The nucleotide sequence of the structural gene for Escherichia coli tryptophanyl-tRNA synthetase.大肠杆菌色氨酰 - tRNA合成酶结构基因的核苷酸序列。
J Biol Chem. 1982 Jun 10;257(11):6132-6.
3
Gene for Escherichia coli glycyl-tRNA synthetase has tandem subunit coding regions in the same reading frame.
“eRF”克隆对应色氨酰 - tRNA合成酶,而非哺乳动物释放因子。
Proc Natl Acad Sci U S A. 1994 Mar 29;91(7):2777-80. doi: 10.1073/pnas.91.7.2777.
4
Polypeptide chain termination in Saccharomyces cerevisiae.酿酒酵母中的多肽链终止
Curr Genet. 1994 May;25(5):385-95. doi: 10.1007/BF00351776.
5
Termination of protein synthesis.蛋白质合成的终止。
Mol Biol Rep. 1994 May;19(3):171-81. doi: 10.1007/BF00986959.
6
Termination of translation in eukaryotes is governed by two interacting polypeptide chain release factors, eRF1 and eRF3.真核生物中翻译的终止由两个相互作用的多肽链释放因子eRF1和eRF3控制。
EMBO J. 1995 Aug 15;14(16):4065-72. doi: 10.1002/j.1460-2075.1995.tb00078.x.
7
The products of the SUP45 (eRF1) and SUP35 genes interact to mediate translation termination in Saccharomyces cerevisiae.SUP45(eRF1)基因和SUP35基因的产物相互作用,介导酿酒酵母中的翻译终止。
EMBO J. 1995 Sep 1;14(17):4365-73. doi: 10.1002/j.1460-2075.1995.tb00111.x.
8
New nucleotide sequence data on the EMBL File Server.欧洲分子生物学实验室文件服务器上的新核苷酸序列数据。
Nucleic Acids Res. 1990 Aug 25;18(16):4971-87. doi: 10.1093/nar/18.16.4971.
9
Eucaryotic codes.真核生物密码子
Experientia. 1990 Dec 1;46(11-12):1106-17. doi: 10.1007/BF01936920.
10
Tryptophanyl-tRNA synthetase-like immunoreactivity in the central nervous system and midgut of the migratory locust. Comparisons with gastrin-cholecystokinin-like and octopamine-like immunoreactivity.飞蝗中枢神经系统和中肠中的色氨酰 - tRNA合成酶样免疫反应性。与胃泌素 - 胆囊收缩素样和章鱼胺样免疫反应性的比较。
Histochemistry. 1990;95(2):195-203. doi: 10.1007/BF00266593.
大肠杆菌甘氨酰 - tRNA合成酶基因在同一阅读框内有串联的亚基编码区。
J Biol Chem. 1982 Nov 10;257(21):12503-8.
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Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.用核酸外切酶III进行单向消化可为DNA测序创建靶向断点。
Gene. 1984 Jun;28(3):351-9. doi: 10.1016/0378-1119(84)90153-7.
5
A simple and very efficient method for generating cDNA libraries.一种简单且非常有效的生成cDNA文库的方法。
Gene. 1983 Nov;25(2-3):263-9. doi: 10.1016/0378-1119(83)90230-5.
6
Mammalian peptide chain termination. II. Codon specificity and GTPase activity of release factor.哺乳动物肽链终止。II. 释放因子的密码子特异性和GTP酶活性。
Proc Natl Acad Sci U S A. 1971 Mar;68(3):619-24. doi: 10.1073/pnas.68.3.619.
7
Peptide chain termination with mammalian release factor.哺乳动物释放因子介导的肽链终止
Proc Natl Acad Sci U S A. 1970 Sep;67(1):99-106. doi: 10.1073/pnas.67.1.99.
8
Peptide chain termination. V. The role of release factors in mRNA terminator codon recognition.肽链终止。V. 释放因子在mRNA终止密码子识别中的作用。
Proc Natl Acad Sci U S A. 1969 Dec;64(4):1235-41. doi: 10.1073/pnas.64.4.1235.
9
Release factors mediating termination of complete proteins.介导完整蛋白质终止的释放因子。
Nature. 1970 Jun 13;226(5250):1029-33. doi: 10.1038/2261029a0.
10
The origin of the genetic code.遗传密码的起源。
J Mol Biol. 1968 Dec;38(3):367-79. doi: 10.1016/0022-2836(68)90392-6.