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在大通道中扩散、排斥和特异性结合:OmpF 选择性反转的研究。

Diffusion, exclusion, and specific binding in a large channel: a study of OmpF selectivity inversion.

机构信息

Departamento de Física, Universitat Jaume I, 12080 Castellón, Spain.

出版信息

Biophys J. 2009 Jan;96(1):56-66. doi: 10.1016/j.bpj.2008.09.024.

Abstract

We find that moderate cationic selectivity of the general bacterial porin OmpF in sodium and potassium chloride solutions is inversed to anionic selectivity in concentrated solutions of barium, calcium, nickel, and magnesium chlorides. To understand the origin of this phenomenon, we consider several factors, which include the binding of divalent cations, electrostatic and steric exclusion of differently charged and differently sized ions, size-dependent hydrodynamic hindrance, electrokinetic effects, and significant "anionic" diffusion potential for bulk solutions of chlorides of divalent cations. Though all these factors contribute to the measured selectivity of this large channel, the observed selectivity inversion is mostly due to the following two. First, binding divalent cations compensates, or even slightly overcompensates, for the negative charge of the OmpF protein, which is known to be the main cause of cationic selectivity in sodium and potassium chloride solutions. Second, the higher anionic (versus cationic) transport rate expected for bulk solutions of chloride salts of divalent cations is the leading cause of the measured anionic selectivity of the channel. Interestingly, at high concentrations the binding of cations does not show any pronounced specificity within the divalent series because the reversal potentials measured in the series correlate well with the corresponding bulk diffusion potentials. Thus our study shows that, in contrast to the highly selective channels of neurophysiology that employ mostly the exclusion mechanism, quite different factors account for the selectivity of large channels. The elucidation of these factors is essential for understanding large channel selectivity and its regulation in vivo.

摘要

我们发现,在氯化钠和氯化钾溶液中,一般细菌孔蛋白 OmpF 对阳离子具有中等的选择性,而在钡、钙、镍和氯化镁的浓溶液中则表现出阴离子的选择性。为了理解这种现象的起源,我们考虑了几个因素,包括二价阳离子的结合、不同电荷和不同大小离子的静电和空间排斥、尺寸依赖的水力阻碍、电动效应以及二价阳离子氯化物的体相溶液中的显著“阴离子”扩散势。虽然所有这些因素都对这个大通道的测量选择性有贡献,但观察到的选择性反转主要归因于以下两个因素。首先,结合二价阳离子补偿了,甚至略微超过了 OmpF 蛋白的负电荷,这是已知导致氯化钠和氯化钾溶液中阳离子选择性的主要原因。其次,对于二价阳离子氯化物的体相溶液,预期的阴离子(相对于阳离子)传输速率更高,这是导致通道测量阴离子选择性的主要原因。有趣的是,在高浓度下,阳离子的结合在二价系列中没有表现出任何明显的特异性,因为在该系列中测量的反转电位与相应的体相扩散电位很好地相关。因此,我们的研究表明,与主要采用排斥机制的神经生理学中高度选择性的通道不同,大通道的选择性由完全不同的因素决定。阐明这些因素对于理解大通道的选择性及其在体内的调节至关重要。

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