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我们从两态折叠体的研究中学到了什么?关于两态蛋白质折叠还有哪些未解决的问题?

What have we learned from the studies of two-state folders, and what are the unanswered questions about two-state protein folding?

作者信息

Barrick Doug

机构信息

T C Department of Biophysics, The Johns Hopkins University, 3400 N Charles St, Baltimore, MD 21218, USA.

出版信息

Phys Biol. 2009 Feb 10;6(1):015001. doi: 10.1088/1478-3975/6/1/015001.

DOI:10.1088/1478-3975/6/1/015001
PMID:19208936
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2822238/
Abstract

Small proteins with globular structures often fold by simple all-or-none mechanisms, both in an equilibrium and a kinetic sense, despite the very large number of partly folded conformations available. This type of 'two-state' folding will be discussed in terms of experimental tests, underlying molecular mechanisms, and limits to two-state behavior. Factors that appear to be important for two-state folding include topology (sequence distance of contacts in the native structure), molecular cooperativity and local energy distribution. Because their local stability distributions and cooperativities can be dissected and analyzed separately from topological features, recent studies of the folding of symmetric proteins will be discussed as a means to better understand the origins of two-state folding.

摘要

具有球状结构的小蛋白质通常通过简单的全或无机制进行折叠,无论是在平衡还是动力学意义上,尽管存在大量部分折叠的构象。这种“两态”折叠将从实验测试、潜在分子机制以及两态行为的局限性等方面进行讨论。对于两态折叠似乎很重要的因素包括拓扑结构(天然结构中接触的序列距离)、分子协同性和局部能量分布。由于它们的局部稳定性分布和协同性可以与拓扑特征分开剖析和分析,因此将讨论对称蛋白质折叠的最新研究,以此作为更好地理解两态折叠起源的一种手段。

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本文引用的文献

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The leucine-rich repeat domain of Internalin B folds along a polarized N-terminal pathway.内化素B富含亮氨酸的重复结构域沿极化的N端途径折叠。
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Rerouting the folding pathway of the Notch ankyrin domain by reshaping the energy landscape.通过重塑能量景观来重新引导Notch锚蛋白结构域的折叠途径。
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