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一种在扩散张量磁共振成像(DT-MRI)分析中纳入解剖学知识的数学框架。

A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI Analysis.

作者信息

Maddah Mahnaz, Zöllei Lilla, Grimson W Eric L, Westin Carl-Fredrik, Wells William M

机构信息

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

出版信息

Proc IEEE Int Symp Biomed Imaging. 2008;4543943:105-108. doi: 10.1109/ISBI.2008.4540943.

DOI:10.1109/ISBI.2008.4540943
PMID:19212449
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2638065/
Abstract

We propose a Bayesian approach to incorporate anatomical information in the clustering of fiber trajectories. An expectation-maximization (EM) algorithm is used to cluster the trajectories, in which an atlas serves as the prior on the labels. The atlas guides the clustering algorithm and makes the resulting bundles anatomically meaningful. In addition, it provides the seed points for the tractography and initial settings of the EM algorithm. The proposed approach provides a robust and automated tool for tract-oriented analysis both in a single subject and over a population.

摘要

我们提出一种贝叶斯方法,将解剖学信息纳入纤维轨迹聚类中。使用期望最大化(EM)算法对轨迹进行聚类,其中图谱用作标签的先验。图谱指导聚类算法,使得到的纤维束在解剖学上具有意义。此外,它为纤维束成像提供种子点和EM算法的初始设置。所提出的方法为单个体和群体的基于纤维束的分析提供了一种强大且自动化的工具。

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本文引用的文献

1
Clustering Fiber Traces Using Normalized Cuts.使用归一化割算法对纤维轨迹进行聚类
Med Image Comput Comput Assist Interv. 2004 Sep 2;3216/2004(3216):368-375. doi: 10.1007/b100265.
2
A unified framework for clustering and quantitative analysis of white matter fiber tracts.白质纤维束聚类与定量分析的统一框架。
Med Image Anal. 2008 Apr;12(2):191-202. doi: 10.1016/j.media.2007.10.003. Epub 2007 Oct 25.
3
A probabilistic model-based approach to consistent white matter tract segmentation.一种基于概率模型的一致性白质束分割方法。
IEEE Trans Med Imaging. 2007 Nov;26(11):1555-61. doi: 10.1109/TMI.2007.905826.
4
Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification.立体定向空间中的纤维束概率图谱:白质解剖结构分析及特定纤维束定量分析
Neuroimage. 2008 Jan 1;39(1):336-47. doi: 10.1016/j.neuroimage.2007.07.053. Epub 2007 Aug 15.
5
Probabilistic clustering and quantitative analysis of white matter fiber tracts.白质纤维束的概率聚类与定量分析
Inf Process Med Imaging. 2007;20:372-83. doi: 10.1007/978-3-540-73273-0_31.
6
Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.用于定量扩散张量磁共振成像分析的纤维束取向统计方法。
Med Image Anal. 2006 Oct;10(5):786-98. doi: 10.1016/j.media.2006.07.003. Epub 2006 Aug 22.
7
Automated atlas-based clustering of white matter fiber tracts from DTMRI.基于图谱自动聚类DTMRI白质纤维束
Med Image Comput Comput Assist Interv. 2005;8(Pt 1):188-95. doi: 10.1007/11566465_24.
8
White matter tract clustering and correspondence in populations.人群中的白质束聚类与对应关系。
Med Image Comput Comput Assist Interv. 2005;8(Pt 1):140-7.
9
White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study.健康受试者与精神分裂症患者白质半球不对称性:一项扩散张量磁共振成像研究。
Neuroimage. 2004 Sep;23(1):213-23. doi: 10.1016/j.neuroimage.2004.04.036.
10
Fiber tract-based atlas of human white matter anatomy.基于纤维束的人类白质解剖图谱。
Radiology. 2004 Jan;230(1):77-87. doi: 10.1148/radiol.2301021640. Epub 2003 Nov 26.