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A reproducible evaluation of ANTs similarity metric performance in brain image registration.在脑影像配准中重复评估 ANTs 相似性度量性能。
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Unsupervised white matter fiber clustering and tract probability map generation: applications of a Gaussian process framework for white matter fibers.无监督白质纤维聚类和束概率图生成:高斯过程框架在白质纤维中的应用。
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Atlas-based whole brain white matter analysis using large deformation diffeomorphic metric mapping: application to normal elderly and Alzheimer's disease participants.基于图谱的全脑白质分析,采用大变形微分同胚度量映射:应用于正常老年人和阿尔茨海默病患者。
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A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI Analysis.一种在扩散张量磁共振成像(DT-MRI)分析中纳入解剖学知识的数学框架。
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Automatic tractography segmentation using a high-dimensional white matter atlas.使用高维白质图谱的自动纤维束成像分割
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通过多图谱标签融合实现自动群体HARDI白质纤维束聚类

Automatic Population HARDI White Matter Tract Clustering by Label Fusion of Multiple Tract Atlases.

作者信息

Jin Yan, Shi Yonggang, Zhan Liang, Li Junning, de Zubicaray Greig I, McMahon Katie L, Martin Nicholas G, Wright Margaret J, Thompson Paul M

机构信息

Laboratory of Neuro Imaging, Department of Neurology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.

University of Queensland, Brisbane St. Lucia, QLD 4072, Australia.

出版信息

Multimodal Brain Image Anal (2012). 2012 Jan 1;7509:147-156. doi: 10.1007/978-3-642-33530-3_12.

DOI:10.1007/978-3-642-33530-3_12
PMID:26207263
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4508862/
Abstract

Automatic labeling of white matter fibres in diffusion-weighted brain MRI is vital for comparing brain integrity and connectivity across populations, but is challenging. Whole brain tractography generates a vast set of fibres throughout the brain, but it is hard to cluster them into anatomically meaningful tracts, due to wide individual variations in the trajectory and shape of white matter pathways. We propose a novel automatic tract labeling algorithm that fuses information from tractography and multiple hand-labeled fibre tract atlases. As streamline tractography can generate a large number of false positive fibres, we developed a top-down approach to extract tracts consistent with known anatomy, based on a distance metric to multiple hand-labeled atlases. Clustering results from different atlases were fused, using a multi-stage fusion scheme. Our "label fusion" method reliably extracted the major tracts from 105-gradient HARDI scans of 100 young normal adults.

摘要

在扩散加权脑磁共振成像中对白质纤维进行自动标记对于比较不同人群的脑完整性和连通性至关重要,但具有挑战性。全脑纤维束成像在整个大脑中生成大量纤维,但由于白质通路的轨迹和形状存在广泛的个体差异,很难将它们聚类成具有解剖学意义的纤维束。我们提出了一种新颖的自动纤维束标记算法,该算法融合了纤维束成像和多个手工标记的纤维束图谱的信息。由于流线型纤维束成像会产生大量假阳性纤维,我们基于与多个手工标记图谱的距离度量,开发了一种自上而下的方法来提取与已知解剖结构一致的纤维束。使用多阶段融合方案融合来自不同图谱的聚类结果。我们的“标签融合”方法从100名年轻正常成年人的105梯度高分辨率扩散成像(HARDI)扫描中可靠地提取了主要纤维束。