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RAPD-PCR分析揭示葡萄牙松材线虫缺乏遗传变异

Lack of Genetic Variation of Bursaphelenchus xylophilus in Portugal Revealed by RAPD-PCR Analyses.

作者信息

Vieira Paulo, Burgermeister Wolfgang, Mota Manuel, Metge Kai, Silva Gonçalo

机构信息

NemaLab-ICAM, Departamento de Biologia, Universidade de Evora, 7002-554 Evora, Portugal Institute for Plant Virology, Microbiology and Biosafety, Federal Biological Research Centre for Agriculture and Forestry (BBA), Messeweg 11-12, D-38104 Braunschweig, Germany.

出版信息

J Nematol. 2007 Jun;39(2):118-26.

Abstract

Random Amplified Polymorphic DNA (RAPD-PCR) technique was used to assess the level of genetic variability and genetic relationships among 24 Portuguese isolates of pinewood nematode, Bursaphelenchus xylophilus. The isolates represent the main infested areas of Portugal. Two additional isolates of B. xylophilus representing North America and East Asia were included, and B. mucronatus was used as out-group. Twenty-eight random primers generated a total of 640 DNA fragments. The Nei and Li similarity index revealed a high genetic similarity among the Portuguese isolates (above 90%). Hierarchical cluster analysis was performed to illustrate the relatedness among the isolates. No indication for separate groups among the Portuguese isolates was obtained, and the low level of genetic diversity strongly suggests that they were dispersed recently from a single introduction. The lack of apparent relationship between the genetic and the geographic matrices of the Portuguese isolates limits the use of this technique for following recent pathways of distribution. Genetic distance of the Portuguese isolates towards an isolate from China was much lower as compared to an isolate from the USA. This confirmed previous results suggesting an East Asian origin of the Portuguese B. xylophilus.

摘要

利用随机扩增多态性DNA(RAPD-PCR)技术评估了24株葡萄牙松材线虫分离株之间的遗传变异水平和遗传关系。这些分离株代表了葡萄牙的主要疫区。另外还纳入了代表北美和东亚的两株松材线虫分离株,并将拟松材线虫用作外群。28条随机引物共产生了640个DNA片段。内氏和李氏相似性指数显示葡萄牙分离株之间具有较高的遗传相似性(超过90%)。进行了层次聚类分析以阐明分离株之间的相关性。未发现葡萄牙分离株中有分组迹象,低水平的遗传多样性强烈表明它们是近期从单一引入源扩散而来的。葡萄牙分离株的遗传矩阵与地理矩阵之间缺乏明显关系,限制了该技术在追踪近期传播途径方面的应用。与来自美国的分离株相比,葡萄牙分离株与来自中国的分离株的遗传距离要低得多。这证实了先前的结果,表明葡萄牙的松材线虫起源于东亚。

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