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1
Finding the fifth base: genome-wide sequencing of cytosine methylation.
Genome Res. 2009 Jun;19(6):959-66. doi: 10.1101/gr.083451.108. Epub 2009 Mar 9.
2
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.
Nature. 2008 Mar 13;452(7184):215-9. doi: 10.1038/nature06745. Epub 2008 Feb 17.
3
Post-conversion targeted capture of modified cytosines in mammalian and plant genomes.
Nucleic Acids Res. 2015 Jul 13;43(12):e81. doi: 10.1093/nar/gkv244. Epub 2015 Mar 26.
4
Bisulfite methylation profiling of large genomes.
Epigenomics. 2010 Apr;2(2):209-20. doi: 10.2217/epi.10.6.
6
Bisulphite sequencing of plant genomic DNA.
Methods Mol Biol. 2010;655:433-43. doi: 10.1007/978-1-60761-765-5_29.
7
Base-resolution detection of N4-methylcytosine in genomic DNA using 4mC-Tet-assisted-bisulfite- sequencing.
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8
Analysis of DNA methylation in plants by bisulfite sequencing.
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9
Nanopore Sequencing and Data Analysis for Base-Resolution Genome-Wide 5-Methylcytosine Profiling.
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DNA Methylation Analysis.
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Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment.
Nat Methods. 2025 Apr;22(4):681-691. doi: 10.1038/s41592-025-02631-4. Epub 2025 Mar 28.
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MethylSeqLogo: DNA methylation smart sequence logos.
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Wemics: A Single-Base Resolution Methylation Quantification Method for Enhanced Prediction of Epigenetic Regulation.
Adv Sci (Weinh). 2024 Jun;11(21):e2308884. doi: 10.1002/advs.202308884. Epub 2024 Mar 28.
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Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment.
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A Critical Analysis of the FDA's Omics-Driven Pharmacodynamic Biomarkers to Establish Biosimilarity.
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Functional genomics in Spiralia.
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本文引用的文献

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Targeted bisulfite sequencing reveals changes in DNA methylation associated with nuclear reprogramming.
Nat Biotechnol. 2009 Apr;27(4):353-60. doi: 10.1038/nbt.1530. Epub 2009 Mar 29.
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Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells.
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RNA-directed DNA methylation induces transcriptional activation in plants.
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Next-generation DNA sequencing.
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The sequencing shakeup.
Nat Biotechnol. 2008 Oct;26(10):1109-12. doi: 10.1038/nbt1008-1109.
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Fixing the front end.
Nat Biotechnol. 2008 Oct;26(10):1101-4. doi: 10.1038/nbt1008-1101.
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ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis.
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Reduced-representation methylation mapping.
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A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis.
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