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eCOMPAGT -- efficient combination and management of phenotypes and genotypes for genetic epidemiology.
BMC Bioinformatics. 2009 May 11;10:139. doi: 10.1186/1471-2105-10-139.
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eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies.
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Unleashing genotypes in epidemiology - A novel method for managing high throughput information.
J Biomed Inform. 2009 Dec;42(6):1029-34. doi: 10.1016/j.jbi.2009.07.005. Epub 2009 Jul 17.
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An integrated system for genetic analysis.
BMC Bioinformatics. 2006 Apr 19;7:210. doi: 10.1186/1471-2105-7-210.
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An integrated system for high throughput TaqMan based SNP genotyping.
Bioinformatics. 2001 Jul;17(7):654-5. doi: 10.1093/bioinformatics/17.7.654.
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SNPflow: a lightweight application for the processing, storing and automatic quality checking of genotyping assays.
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GMFilter and SXTestPlate: software tools for improving the SNPlex genotyping system.
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Laboratory Information Management Software for genotyping workflows: applications in high throughput crop genotyping.
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RAMEDIS: the rare metabolic diseases database.
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Gigwa v2-Extended and improved genotype investigator.
Gigascience. 2019 May 1;8(5). doi: 10.1093/gigascience/giz051.

引用本文的文献

1
SNPflow: a lightweight application for the processing, storing and automatic quality checking of genotyping assays.
PLoS One. 2013;8(3):e59508. doi: 10.1371/journal.pone.0059508. Epub 2013 Mar 19.
2
MolabIS--an integrated information system for storing and managing molecular genetics data.
BMC Bioinformatics. 2011 Oct 31;12:425. doi: 10.1186/1471-2105-12-425.
3
Somatic mutations throughout the entire mitochondrial genome are associated with elevated PSA levels in prostate cancer patients.
Am J Hum Genet. 2010 Dec 10;87(6):802-12. doi: 10.1016/j.ajhg.2010.11.001.
4
CONAN: copy number variation analysis software for genome-wide association studies.
BMC Bioinformatics. 2010 Jun 14;11:318. doi: 10.1186/1471-2105-11-318.
5
eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies.
BMC Bioinformatics. 2010 Mar 9;11:122. doi: 10.1186/1471-2105-11-122.

本文引用的文献

1
Genome-wide association studies: a new window into immune-mediated diseases.
Nat Rev Immunol. 2008 Aug;8(8):631-43. doi: 10.1038/nri2361.
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Genome-wide association studies for complex traits: consensus, uncertainty and challenges.
Nat Rev Genet. 2008 May;9(5):356-69. doi: 10.1038/nrg2344.
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SNPLims: a data management system for genome wide association studies.
BMC Bioinformatics. 2008 Mar 26;9 Suppl 2(Suppl 2):S13. doi: 10.1186/1471-2105-9-S2-S13.
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Genome-wide association studies in aging-related processes such as diabetes mellitus, atherosclerosis and cancer.
Exp Gerontol. 2008 Jan;43(1):39-43. doi: 10.1016/j.exger.2007.09.005. Epub 2007 Sep 29.
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MLGA--a rapid and cost-efficient assay for gene copy-number analysis.
Nucleic Acids Res. 2007;35(17):e115. doi: 10.1093/nar/gkm651. Epub 2007 Sep 6.
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Replicating genotype-phenotype associations.
Nature. 2007 Jun 7;447(7145):655-60. doi: 10.1038/447655a.
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Global variation in copy number in the human genome.
Nature. 2006 Nov 23;444(7118):444-54. doi: 10.1038/nature05329.
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Common genetic variants for breast cancer: 32 largely refuted candidates and larger prospects.
J Natl Cancer Inst. 2006 Oct 4;98(19):1350-3. doi: 10.1093/jnci/djj392.
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An integrated system for genetic analysis.
BMC Bioinformatics. 2006 Apr 19;7:210. doi: 10.1186/1471-2105-7-210.
10
T.I.M.S: TaqMan Information Management System, tools to organize data flow in a genotyping laboratory.
BMC Bioinformatics. 2005 Oct 12;6:246. doi: 10.1186/1471-2105-6-246.

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