Suppr超能文献

通过功能宏基因组学对南极土壤样本进行细菌纤维素生物合成的研究洞察

Insights into bacterial cellulose biosynthesis by functional metagenomics on Antarctic soil samples.

作者信息

Berlemont Renaud, Delsaute Maud, Pipers Delphine, D'Amico Salvino, Feller Georges, Galleni Moreno, Power Pablo

机构信息

Laboratory of Biological Macromolecules, Centre d'Ingéniérie des Proteines, University of Liège, Institut de Chimie B6a, Liège, Sart-Tilman, Belgium.

出版信息

ISME J. 2009 Sep;3(9):1070-81. doi: 10.1038/ismej.2009.48. Epub 2009 May 21.

Abstract

In this study, the mining of an Antarctic soil sample by functional metagenomics allowed the isolation of a cold-adapted protein (RBcel1) that hydrolyzes only carboxymethyl cellulose. The new enzyme is related to family 5 of the glycosyl hydrolase (GH5) protein from Pseudomonas stutzeri (Pst_2494) and does not possess a carbohydrate-binding domain. The protein was produced and purified to homogeneity. RBcel1 displayed an endoglucanase activity, producing cellobiose and cellotriose, using carboxymethyl cellulose as a substrate. Moreover, the study of pH and the thermal dependence of the hydrolytic activity shows that RBcel1 was active from pH 6 to pH 9 and remained significantly active when temperature decreased (18% of activity at 10 degrees C). It is interesting that RBcel1 was able to synthetize non-reticulated cellulose using cellobiose as a substrate. Moreover, by a combination of bioinformatics and enzyme analysis, the physiological relevance of the RBcel1 protein and its mesophilic homologous Pst_2494 protein from P. stutzeri, A1501, was established as the key enzymes involved in the production of cellulose by bacteria. In addition, RBcel1 and Pst_2494 are the two primary enzymes belonging to the GH5 family involved in this process.

摘要

在本研究中,通过功能宏基因组学对一份南极土壤样本进行挖掘,分离出了一种仅能水解羧甲基纤维素的冷适应蛋白(RBcel1)。这种新酶与来自斯氏假单胞菌(Pst_2494)的糖基水解酶(GH5)蛋白家族5相关,且不具备碳水化合物结合结构域。该蛋白经生产和纯化后达到了均一性。RBcel1表现出内切葡聚糖酶活性,以羧甲基纤维素为底物生成纤维二糖和纤维三糖。此外,对水解活性的pH值和热依赖性研究表明,RBcel1在pH值6至9时具有活性,并且当温度降低时仍保持显著活性(在10摄氏度时活性为18%)。有趣的是,RBcel1能够以纤维二糖为底物合成非网状纤维素。此外,通过生物信息学和酶分析相结合,确定了RBcel1蛋白及其来自斯氏假单胞菌A1501的嗜温同源蛋白Pst_2494在细菌纤维素生产过程中作为关键酶的生理相关性。此外,RBcel1和Pst_2494是参与此过程的GH5家族的两种主要酶。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验