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嗜碱铁杆菌属新属、新种及拉氏铁杆菌新种,拟杆菌门“几丁质噬菌科”新成员,从淡水沉积物中分离得到。

Ferruginibacter alkalilentus gen. nov., sp. nov. and Ferruginibacter lapsinanis sp. nov., novel members of the family 'Chitinophagaceae' in the phylum Bacteroidetes, isolated from freshwater sediment.

作者信息

Lim Ju Hyoung, Baek Sang-Hoon, Lee Sung-Taik

机构信息

Environmental and Molecular Microbiology Lab., Department of Biological Sciences, KAIST, 335 Gwahangno, Yuseong-gu, Daejeon 305-701, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2009 Oct;59(Pt 10):2394-9. doi: 10.1099/ijs.0.009480-0. Epub 2009 Jul 20.

DOI:10.1099/ijs.0.009480-0
PMID:19620358
Abstract

Six Gram-negative, non-gliding, rod-shaped bacterial strains isolated from freshwater sediment were subjected to polyphasic analyses to determine their taxonomic positions. Analysis of the 16S rRNA gene sequences of the six strains revealed that they represent two separate genomic species in a new lineage within the phylum Bacteroidetes, related to members of the family 'Chitinophagaceae', in which they were most closely related to members of the genus Terrimonas (93.4-90.5 %). Two of the isolates, HU1-GD23(T) and HU1-HG42(T), had a sequence similarity of 96.2 %, with DNA G+C contents of 39.4 and 38.5 mol%, respectively. They possessed MK-7 as the predominant respiratory quinone and contained high amounts of iso-pentadecanoic acid and 3-hydroxy-iso-heptadecanoic acid in their cell envelopes, properties shared by members of the family 'Chitinophagaceae'. They were well differentiated from other members of the family 'Chitinophagaceae' by additional physiological and biochemical characteristics. In conclusion, strains HU1-GD23(T) (=KCTC 22306(T)=LMG 24312(T)) and HU1-HG42(T) (=KCTC 22305(T)=LMG 24324(T)) are considered to represent two novel species of a novel genus, Ferruginibacter gen. nov., for which the names Ferruginibacter alkalilentus sp. nov. and Ferruginibacter lapsinanis sp. nov., are proposed, respectively.

摘要

从淡水沉积物中分离出的6株革兰氏阴性、无滑行能力、杆状细菌菌株进行了多相分析,以确定它们的分类地位。对这6株菌株的16S rRNA基因序列分析表明,它们代表拟杆菌门内一个新谱系中的两个独立基因组种,与“噬几丁质菌科”的成员相关,其中它们与地生单胞菌属的成员关系最为密切(93.4 - 90.5%)。其中两株分离株HU1 - GD23(T)和HU1 - HG42(T)的序列相似性为96.2%,DNA G + C含量分别为39.4和38.5 mol%。它们以MK - 7作为主要呼吸醌,细胞包膜中含有大量异十五烷酸和3 - 羟基异十七烷酸,这些是“噬几丁质菌科”成员共有的特性。通过其他生理生化特征,它们与“噬几丁质菌科”的其他成员有明显区别。总之,菌株HU1 - GD23(T)(=KCTC 22306(T)=LMG 24312(T))和HU1 - HG42(T)(=KCTC 22305(T)=LMG 24324(T))被认为代表一个新属——铁锈杆菌属(Ferruginibacter gen. nov.)的两个新种,分别提议将其命名为嗜碱铁锈杆菌(Ferruginibacter alkalilentus sp. nov.)和沉积铁锈杆菌(Ferruginibacter lapsinanis sp. nov.)。

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