Jin Long, Lee Hyung-Gwan, La Hyun-Joon, Ko So-Ra, Ahn Chi-Yong, Oh Hee-Mock
Environmental Biotechnology Research Center, Korea Research Institute of Bioscience & Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon, 305-806, Republic of Korea.
Antonie Van Leeuwenhoek. 2014 Aug;106(2):319-23. doi: 10.1007/s10482-014-0202-8. Epub 2014 Jun 11.
A Gram-negative, aerobic, non-motile, and rod-shaped bacterium, designated strain DS48-5-3(T), was isolated from a 48 m sediment sample taken from Daechung Reservoir, Republic of Korea. Comparative 16S rRNA gene sequence studies showed a clear affiliation of this strain to the Bacteroidetes, notably most closely related to Ferruginibacter alkalilentus HU1-GD23(T), Ferruginibacter lapsinanis HU1-HG42(T) and Ferruginibacter yonginensis HME8442(T), showing 16S rRNA gene sequence similarities to the type strains of these species of 95.2-96.4 % similarity. The predominant ubiquinone was identified as MK-7. The major fatty acids were identified as iso-C15:0, iso-C17:0 3-OH, and iso-C15:1 G. The G+C content of the genomic DNA of strain DS48-5-3(T) was determined to be 37.2 %. On the basis of polyphasic evidence, it is proposed that strain DS48-5-3(T) should belong to a novel species, for which the name Ferruginibacter profundus sp. nov. (type strain DS48-5-3(T) = KCTC 32478(T) = JCM 19431(T)), is proposed.
从韩国达川水库采集的48米沉积物样本中分离出一株革兰氏阴性、需氧、无运动性的杆状细菌,命名为菌株DS48-5-3(T)。16S rRNA基因序列比较研究表明,该菌株与拟杆菌门有明确的亲缘关系,尤其与嗜碱亚铁杆菌HU1-GD23(T)、拉普西亚铁杆菌HU1-HG42(T)和龙仁亚铁杆菌HME8442(T)关系最为密切,与这些物种模式菌株的16S rRNA基因序列相似性为95.2-96.4%。主要泛醌被鉴定为MK-7。主要脂肪酸被鉴定为异-C15:0、异-C17:0 3-OH和异-C15:1 G。菌株DS48-5-3(T)基因组DNA的G+C含量测定为37.2%。基于多相证据,建议将菌株DS48-5-3(T)归为一个新物种,命名为深海亚铁杆菌(Ferruginibacter profundus)新种(模式菌株DS48-5-3(T) = KCTC 32478(T) = JCM 19431(T))。