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PKQuest_Java:免费的交互式生理药代动力学软件包及教程。

PKQuest_Java: free, interactive physiologically based pharmacokinetic software package and tutorial.

作者信息

Levitt David G

机构信息

Department of Integrative Biology and Physiology, University of Minnesota, Minneapolis, MN 55455, USA.

出版信息

BMC Res Notes. 2009 Aug 5;2:158. doi: 10.1186/1756-0500-2-158.

DOI:10.1186/1756-0500-2-158
PMID:19656378
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2728517/
Abstract

BACKGROUND

Physiologically based pharmacokinetics (PBPK) uses a realistic organ model to describe drug kinetics. The blood-tissue exchange of each organ is characterized by its volume, perfusion, metabolism, capillary permeability and blood/tissue partition coefficient. PBPK applications require both sophisticated mathematical modeling software and a reliable complete set of physiological parameters. Currently there are no software packages available that combine ease of use with the versatility that is required of a general PBPK program.

FINDINGS

The program is written in Java and is available for free download at http://www.pkquest.com/. Included in the download is a detailed tutorial that discusses the pharmacokinetics of 6 solutes (D2O, amoxicillin, desflurane, propofol, ethanol and thiopental) illustrated using experimental human pharmacokinetic data. The complete PBPK description for each solute is stored in Excel spreadsheets that are included in the download. The main features of the program are: 1) Intuitive and versatile interactive interface; 2) Absolute and semi-logarithmic graphical output; 3) Pre-programmed optimized human parameter data set (but, arbitrary values can be input); 4) Time dependent changes in the PBPK parameters; 5) Non-linear parameter optimization; 6) Unique approach to determine the oral "first pass metabolism" of non-linear solutes (e.g. ethanol); 7) Pulmonary perfusion/ventilation heterogeneity for volatile solutes; 8) Input and output of Excel spreadsheet data; 9) Antecubital vein sampling.

CONCLUSION

PKQuest_Java is a free, easy to use, interactive PBPK software routine. The user can either directly use the pre-programmed optimized human or rat data set, or enter an arbitrary data set. It is designed so that drugs that are classified as "extracellular" or "highly fat soluble" do not require information about tissue/blood partition coefficients and can be modeled by a minimum of user input parameters. PKQuest_Java, along with the included tutorial, could be used as the basis of an interactive, on-line, pharmacokinetic course.

摘要

背景

基于生理的药代动力学(PBPK)使用逼真的器官模型来描述药物动力学。每个器官的血液-组织交换由其体积、灌注、代谢、毛细血管通透性和血液/组织分配系数来表征。PBPK的应用既需要复杂的数学建模软件,也需要一套可靠完整的生理参数。目前没有既易于使用又具备通用PBPK程序所需多功能性的软件包。

研究结果

该程序用Java编写,可在http://www.pkquest.com/免费下载。下载内容包括一个详细教程,讨论了使用实验性人体药代动力学数据说明的6种溶质(重水、阿莫西林、地氟烷、丙泊酚、乙醇和硫喷妥钠)的药代动力学。每种溶质的完整PBPK描述存储在下载内容所包含的Excel电子表格中。该程序的主要特点有:1)直观且多功能的交互式界面;2)绝对和半对数图形输出;3)预编程的优化人体参数数据集(但也可输入任意值);4)PBPK参数随时间的变化;5)非线性参数优化;6)确定非线性溶质(如乙醇)口服“首过代谢”的独特方法;7)挥发性溶质的肺灌注/通气不均一性;8)Excel电子表格数据的输入和输出;9)肘前静脉采样。

结论

PKQuest_Java是一个免费、易于使用的交互式PBPK软件程序。用户既可以直接使用预编程的优化人体或大鼠数据集,也可以输入任意数据集。其设计使得被归类为“细胞外”或“高脂溶性”的药物不需要组织/血液分配系数信息,并且可以用最少的用户输入参数进行建模。PKQuest_Java以及所包含的教程可作为交互式在线药代动力学课程的基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/194f6db2d5e5/1756-0500-2-158-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/38103b3425e4/1756-0500-2-158-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/21ddd548312c/1756-0500-2-158-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/194f6db2d5e5/1756-0500-2-158-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/38103b3425e4/1756-0500-2-158-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/21ddd548312c/1756-0500-2-158-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e62/2728517/194f6db2d5e5/1756-0500-2-158-3.jpg

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