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马铃薯(Solanum tuberosum L.)中一个失活的patatin基因启动子区域存在类转座子元件

Presence of a transposon-like element in the promoter region of an inactive patatin gene in Solanum tuberosum L.

作者信息

Köster-Töpfer M, Frommer W B, Rocha-Sosa M, Willmitzer L

机构信息

IGF Berlin, Federal Republic of Germany.

出版信息

Plant Mol Biol. 1990 Feb;14(2):239-47. doi: 10.1007/BF00018564.

DOI:10.1007/BF00018564
PMID:1966274
Abstract

The promoter of the PGT3 patatin gene belonging to the class II subfamily is highly homologous to other class II patatin genes except for a 736 bp insertion in front of the putative transcription start site. The insertion is characterized by structural features resembling a transposable element such as an 11 bp inverted repeat at the termini and an 8 bp duplication flanking the insertion site. Despite the high homology to active patatin genes, fusion of its promoter to the beta-glucuronidase reporter gene does not lead to detectable beta-glucuronidase (GUS) activity in transgenic potato or tobacco plants, suggesting that the inactivation of this gene might be caused by the insertion of the transposon like element.

摘要

属于II类亚家族的PGT3 马铃薯块茎蛋白基因的启动子,与其他II类马铃薯块茎蛋白基因高度同源,但在假定转录起始位点前有一个736 bp的插入序列。该插入序列的结构特征类似于转座元件,例如末端有一个11 bp的反向重复序列,插入位点两侧有一个8 bp的重复序列。尽管与活性马铃薯块茎蛋白基因高度同源,但其启动子与β-葡萄糖醛酸酶报告基因融合后,在转基因马铃薯或烟草植株中并未检测到β-葡萄糖醛酸酶(GUS)活性,这表明该基因的失活可能是由类转座子元件的插入导致的。

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本文引用的文献

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Plant Mol Biol. 1988 Sep;10(5):423-33. doi: 10.1007/BF00014948.
2
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Plant Mol Biol. 1987 Jul;9(4):345-75. doi: 10.1007/BF00014911.
3
Analysis of a chimeric class-I patatin-GUS gene in transgenic potato plants: High-level expression in tubers and sucrose-inducible expression in cultured leaf and stem explants.
烟草(Nicotiana plumbaginifolia)基因组的一个新的中度重复序列。
Plant Mol Biol. 1993 Oct;23(2):435-8. doi: 10.1007/BF00029020.
4
Isolation and molecular characterization of dTnp1, a mobile and defective transposable element of Nicotiana plumbaginifolia.烟草中一个可移动的缺陷型转座元件dTnp1的分离与分子特征分析
Mol Gen Genet. 1994 Jan;242(2):194-200. doi: 10.1007/BF00391013.
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The Tc5 family of transposable elements in Caenorhabditis elegans.秀丽隐杆线虫中的Tc5转座元件家族。
Genetics. 1994 Jul;137(3):771-81. doi: 10.1093/genetics/137.3.771.
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Guest: a 98 bp inverted repeat transposable element in Neurospora crassa.宾客:粗糙脉孢菌中的一个98碱基对的反向重复转座元件。
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Plant Cell. 1990 Nov;2(11):1121-8. doi: 10.1105/tpc.2.11.1121.
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