• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于优化后的参数值比较早期爆发检测算法。

Comparing early outbreak detection algorithms based on their optimized parameter values.

机构信息

Institute for Infectious Diseases, Beijing Center for Disease Prevention and Control, Capital Medical University School of Public Health and Family Medicine, Beijing 100013, China.

出版信息

J Biomed Inform. 2010 Feb;43(1):97-103. doi: 10.1016/j.jbi.2009.08.003. Epub 2009 Aug 13.

DOI:10.1016/j.jbi.2009.08.003
PMID:19683069
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7185865/
Abstract

BACKGROUND

Many researchers have evaluated the performance of outbreak detection algorithms with recommended parameter values. However, the influence of parameter values on algorithm performance is often ignored.

METHODS

Based on reported case counts of bacillary dysentery from 2005 to 2007 in Beijing, semi-synthetic datasets containing outbreak signals were simulated to evaluate the performance of five outbreak detection algorithms. Parameters' values were optimized prior to the evaluation.

RESULTS

Differences in performances were observed as parameter values changed. Of the five algorithms, space-time permutation scan statistics had a specificity of 99.9% and a detection time of less than half a day. The exponential weighted moving average exhibited the shortest detection time of 0.1 day, while the modified C1, C2 and C3 exhibited a detection time of close to one day.

CONCLUSION

The performance of these algorithms has a correlation to their parameter values, which may affect the performance evaluation.

摘要

背景

许多研究人员已经使用推荐的参数值评估了爆发检测算法的性能。然而,参数值对算法性能的影响往往被忽视。

方法

基于 2005 年至 2007 年北京细菌性痢疾报告病例数,模拟了包含爆发信号的半合成数据集,以评估五种爆发检测算法的性能。在评估之前,对参数值进行了优化。

结果

随着参数值的变化,观察到性能存在差异。在这五种算法中,时空置换扫描统计具有 99.9%的特异性和不到半天的检测时间。指数加权移动平均表现出最短的检测时间为 0.1 天,而修正的 C1、C2 和 C3 则接近一天的检测时间。

结论

这些算法的性能与其参数值相关,这可能会影响性能评估。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/dd4d3434091c/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/abcc547c637c/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/0bfe938816cf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/6a80a904b788/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/dd4d3434091c/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/abcc547c637c/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/0bfe938816cf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/6a80a904b788/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6bef/7185865/dd4d3434091c/gr4.jpg

相似文献

1
Comparing early outbreak detection algorithms based on their optimized parameter values.基于优化后的参数值比较早期爆发检测算法。
J Biomed Inform. 2010 Feb;43(1):97-103. doi: 10.1016/j.jbi.2009.08.003. Epub 2009 Aug 13.
2
[Comparison between early outbreak detection models and simulated outbreaks of measles in Beijing].[北京麻疹早期疫情检测模型与模拟疫情的比较]
Zhonghua Liu Xing Bing Xue Za Zhi. 2009 Feb;30(2):159-62.
3
Estimating the joint disease outbreak-detection time when an automated biosurveillance system is augmenting traditional clinical case finding.当自动化生物监测系统辅助传统临床病例发现时,估计联合疾病爆发检测时间。
J Biomed Inform. 2008 Apr;41(2):224-31. doi: 10.1016/j.jbi.2007.11.002. Epub 2007 Nov 21.
4
Epidemic features affecting the performance of outbreak detection algorithms.影响疫情爆发检测算法性能的疫情特征。
BMC Public Health. 2012 Jun 8;12:418. doi: 10.1186/1471-2458-12-418.
5
A simulation study comparing aberration detection algorithms for syndromic surveillance.一项比较用于症状监测的像差检测算法的模拟研究。
BMC Med Inform Decis Mak. 2007 Mar 1;7:6. doi: 10.1186/1472-6947-7-6.
6
CASE: a framework for computer supported outbreak detection.案例:一个用于计算机支持的爆发检测的框架。
BMC Med Inform Decis Mak. 2010 Mar 12;10:14. doi: 10.1186/1472-6947-10-14.
7
The comparative performance of wavelet-based outbreak detector, exponential weighted moving average, and Poisson regression-based methods in detection of pertussis outbreaks in Iranian infants: A simulation-based study.基于小波的暴发探测器、指数加权移动平均和泊松回归方法在检测伊朗婴儿百日咳暴发中的比较性能:基于模拟的研究。
Pediatr Pulmonol. 2020 Dec;55(12):3497-3508. doi: 10.1002/ppul.25036. Epub 2020 Sep 24.
8
Evaluating and implementing temporal, spatial, and spatio-temporal methods for outbreak detection in a local syndromic surveillance system.评估并实施用于本地症状监测系统中疫情检测的时间、空间和时空方法。
PLoS One. 2017 Sep 8;12(9):e0184419. doi: 10.1371/journal.pone.0184419. eCollection 2017.
9
Recombinant temporal aberration detection algorithms for enhanced biosurveillance.用于增强生物监测的重组时间偏差检测算法
J Am Med Inform Assoc. 2008 Jan-Feb;15(1):77-86. doi: 10.1197/jamia.M2587. Epub 2007 Oct 18.
10
[The comparison of two different types of baseline data regarding the performance of aberration detection algorithm for infectious disease outbreaks].[关于传染病暴发异常检测算法性能的两种不同类型基线数据的比较]
Zhonghua Liu Xing Bing Xue Za Zhi. 2011 Jun;32(6):579-82.

引用本文的文献

1
Comparison of Three Influenza Surveillance Data Sources for Timely Detection of Epidemic Onset - Chengdu City, Sichuan Province and Beijing Municipality, China, 2017-2023.三种流感监测数据源用于及时发现疫情暴发的比较——中国四川省成都市和北京市,2017-2023年
China CDC Wkly. 2024 Sep 6;6(36):918-923. doi: 10.46234/ccdcw2024.194.
2
Enhancing Public Health Surveillance: Outbreak Detection Algorithms Deployed for Syndromic Surveillance During Arbaeenia Mass Gatherings in Iraq.加强公共卫生监测:伊拉克阿尔巴尼亚大规模集会期间用于症状监测的疫情检测算法
Cureus. 2024 May 12;16(5):e60134. doi: 10.7759/cureus.60134. eCollection 2024 May.
3

本文引用的文献

1
Comparing syndromic surveillance detection methods: EARS' versus a CUSUM-based methodology.比较症状监测检测方法:急诊室监测系统(EARS)与基于累积和(CUSUM)的方法。
Stat Med. 2008 Jul 30;27(17):3407-29. doi: 10.1002/sim.3197.
2
The CUSUM chart method as a tool for continuous monitoring of clinical outcomes using routinely collected data.累积和(CUSUM)图法作为一种利用常规收集的数据对临床结果进行持续监测的工具。
BMC Med Res Methodol. 2007 Nov 3;7:46. doi: 10.1186/1471-2288-7-46.
3
Conceptual model for automatic early warning information system of infectious diseases based on internet reporting surveillance system.
Evaluation of the application of sequence data to the identification of outbreaks of disease using anomaly detection methods.
利用异常检测方法评估序列数据在疾病暴发识别中的应用。
Vet Res. 2023 Sep 8;54(1):75. doi: 10.1186/s13567-023-01197-3.
4
Real-time risk ranking of emerging epidemics based on optimized moving average prediction limit-taking the COVID-19 pandemic as an example.基于优化移动平均预测限的新兴传染病实时风险排名——以 COVID-19 大流行为例。
BMC Public Health. 2023 Jun 1;23(1):1039. doi: 10.1186/s12889-023-15835-0.
5
Cluster Detection Mechanisms for Syndromic Surveillance Systems: Systematic Review and Framework Development.症候群监测系统的集群检测机制:系统评价与框架开发。
JMIR Public Health Surveill. 2020 May 26;6(2):e11512. doi: 10.2196/11512.
6
Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System.传染病季节性对中国传染病自动预警与响应系统中暴发检测算法性能的影响
J Int Med Res. 2018 Jan;46(1):98-106. doi: 10.1177/0300060517718770. Epub 2017 Jul 21.
7
Evaluation and comparison of statistical methods for early temporal detection of outbreaks: A simulation-based study.早期爆发时间检测统计方法的评估与比较:一项基于模拟的研究
PLoS One. 2017 Jul 17;12(7):e0181227. doi: 10.1371/journal.pone.0181227. eCollection 2017.
8
How to select a proper early warning threshold to detect infectious disease outbreaks based on the China infectious disease automated alert and response system (CIDARS).如何基于中国传染病自动预警与响应系统(CIDARS)选择合适的早期预警阈值以检测传染病暴发。
BMC Public Health. 2017 Jun 12;17(1):570. doi: 10.1186/s12889-017-4488-0.
9
Implementation and Initial Analysis of a Laboratory-Based Weekly Biosurveillance System, Provence-Alpes-Côte d'Azur, France.法国普罗旺斯-阿尔卑斯-蓝色海岸大区基于实验室的每周生物监测系统的实施与初步分析
Emerg Infect Dis. 2017 Apr;23(4):582-589. doi: 10.3201/eid2304.161399.
10
Hand, foot and mouth disease in China: evaluating an automated system for the detection of outbreaks.中国的手足口病:评估一个用于检测疫情爆发的自动化系统。
Bull World Health Organ. 2014 Sep 1;92(9):656-63. doi: 10.2471/BLT.13.130666. Epub 2014 Jun 23.
基于网络直报监测系统的传染病自动预警信息系统概念模型
Biomed Environ Sci. 2007 Jun;20(3):208-11.
4
[Analysis about epidemic situation of dysentery near upon fourteen years in Beijing].[北京近十四年痢疾疫情分析]
Zhonghua Yu Fang Yi Xue Za Zhi. 2007 Jan;41(1):54-7.
5
A simulation study comparing aberration detection algorithms for syndromic surveillance.一项比较用于症状监测的像差检测算法的模拟研究。
BMC Med Inform Decis Mak. 2007 Mar 1;7:6. doi: 10.1186/1472-6947-7-6.
6
Evaluating detection of an inhalational anthrax outbreak.评估吸入性炭疽疫情的检测情况。
Emerg Infect Dis. 2006 Dec;12(12):1942-9. doi: 10.3201/eid1212.060331.
7
Approaches to the evaluation of outbreak detection methods.疫情检测方法的评估方法。
BMC Public Health. 2006 Oct 24;6:263. doi: 10.1186/1471-2458-6-263.
8
A multicentre study of Shigella diarrhoea in six Asian countries: disease burden, clinical manifestations, and microbiology.一项在六个亚洲国家开展的志贺氏菌腹泻多中心研究:疾病负担、临床表现及微生物学
PLoS Med. 2006 Sep;3(9):e353. doi: 10.1371/journal.pmed.0030353.
9
An open source environment for the statistical evaluation of outbreak detection methods.用于暴发检测方法统计评估的开源环境。
AMIA Annu Symp Proc. 2005;2005:1037.
10
The exponentially weighted moving average (EWMA) rule compared with traditionally used quality control rules.指数加权移动平均(EWMA)规则与传统使用的质量控制规则的比较。
Clin Chem Lab Med. 2006;44(4):396-9. doi: 10.1515/CCLM.2006.077.