SnoopCGH：用于可视化比较基因组杂交数据的软件。
SnoopCGH: software for visualizing comparative genomic hybridization data.
机构信息
Wellcome Trust Sanger Institute, Hinxton, The Weatherall Institute of Molecular Medicine and Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.
出版信息
Bioinformatics. 2009 Oct 15;25(20):2732-3. doi: 10.1093/bioinformatics/btp488. Epub 2009 Aug 16.
UNLABELLED
Array-based comparative genomic hybridization (CGH) technology is used to discover and validate genomic structural variation, including copy number variants, insertions, deletions and other structural variants (SVs). The visualization and summarization of the array CGH data outputs, potentially across many samples, is an important process in the identification and analysis of SVs. We have developed a software tool for SV analysis using data from array CGH technologies, which is also amenable to short-read sequence data.
AVAILABILITY AND IMPLEMENTATION
SnoopCGH is written in java and is available from http://snoopcgh.sourceforge.net/
未加标签
基于阵列的比较基因组杂交 (CGH) 技术用于发现和验证基因组结构变异，包括拷贝数变异、插入、缺失和其他结构变异 (SVs)。对可能来自多个样本的阵列 CGH 数据输出进行可视化和总结是识别和分析 SVs 的重要过程。我们开发了一种使用来自阵列 CGH 技术的数据进行 SV 分析的软件工具，该工具也适用于短读序列数据。
可用性和实现
SnoopCGH 是用 Java 编写的，可以从 http://snoopcgh.sourceforge.net/ 获得。
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