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组蛋白去甲基酶 UTX 和染色质重塑酶 BRM 直接结合 CBP,并调节组蛋白 H3 赖氨酸 27 的乙酰化。

Histone demethylase UTX and chromatin remodeler BRM bind directly to CBP and modulate acetylation of histone H3 lysine 27.

机构信息

Department of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, Ohio, USA.

出版信息

Mol Cell Biol. 2012 Jun;32(12):2323-34. doi: 10.1128/MCB.06392-11. Epub 2012 Apr 9.

DOI:10.1128/MCB.06392-11
PMID:22493065
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3372260/
Abstract

Trithorax group (TrxG) proteins antagonize Polycomb silencing and are required for maintenance of transcriptionally active states. We previously showed that the Drosophila melanogaster acetyltransferase CREB-binding protein (CBP) acetylates histone H3 lysine 27 (H3K27ac), thereby directly blocking its trimethylation (H3K27me3) by Polycomb repressive complex 2 (PRC2) in Polycomb target genes. Here, we show that H3K27ac levels also depend on other TrxG proteins, including the histone H3K27-specific demethylase UTX and the chromatin-remodeling ATPase Brahma (BRM). We show that UTX and BRM are physically associated with CBP in vivo and that UTX, BRM, and CBP colocalize genome-wide on Polycomb response elements (PREs) and on many active Polycomb target genes marked by H3K27ac. UTX and BRM bind directly to conserved zinc fingers of CBP, suggesting that their individual activities are functionally coupled in vivo. The bromodomain-containing C terminus of BRM binds to the CBP PHD finger, enhances PHD binding to histone H3, and enhances in vitro acetylation of H3K27 by recombinant CBP. brm mutations and knockdown of UTX by RNA interference (RNAi) reduce H3K27ac levels and increase H3K27me3 levels. We propose that direct binding of UTX and BRM to CBP and their modulation of H3K27ac play an important role in antagonizing Polycomb silencing.

摘要

三价组蛋白 (TrxG) 蛋白拮抗多梳抑制,并需要维持转录活跃状态。我们之前表明,黑腹果蝇乙酰转移酶 CREB 结合蛋白 (CBP) 乙酰化组蛋白 H3 赖氨酸 27 (H3K27ac),从而直接阻止其多梳抑制复合物 2 (PRC2) 在多梳靶基因中三甲基化 (H3K27me3)。在这里,我们表明 H3K27ac 水平也依赖于其他 TrxG 蛋白,包括组蛋白 H3K27 特异性去甲基酶 UTX 和染色质重塑 ATP 酶 Brahma (BRM)。我们表明,UTX 和 BRM 在体内与 CBP 物理相关,并且 UTX、BRM 和 CBP 在全基因组上在多梳反应元件 (PREs) 上以及在许多由 H3K27ac 标记的活性多梳靶基因上共定位。UTX 和 BRM 直接结合到 CBP 的保守锌指上,这表明它们的个体活性在体内功能上是耦合的。BRM 的含有溴结构域的 C 末端结合到 CBP 的 PHD 指上,增强 PHD 与组蛋白 H3 的结合,并增强重组 CBP 对 H3K27ac 的体外乙酰化作用。brm 突变和 RNA 干扰 (RNAi) 敲低 UTX 降低了 H3K27ac 水平并增加了 H3K27me3 水平。我们提出,UTX 和 BRM 与 CBP 的直接结合及其对 H3K27ac 的调节在拮抗多梳抑制中起着重要作用。

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本文引用的文献

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The COMPASS family of H3K4 methylases in Drosophila.果蝇中的 COMPASS 家族 H3K4 甲基转移酶。
Mol Cell Biol. 2011 Nov;31(21):4310-8. doi: 10.1128/MCB.06092-11. Epub 2011 Aug 29.
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A barrier-only boundary element delimits the formation of facultative heterochromatin in Drosophila melanogaster and vertebrates.仅有屏障的边界元素限定了果蝇和脊椎动物中兼性异染色质的形成。
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Dynamic acetylation of all lysine-4 trimethylated histone H3 is evolutionarily conserved and mediated by p300/CBP.组蛋白 H3 赖氨酸-4 三甲基化所有赖氨酸的动态乙酰化在进化上是保守的,由 p300/CBP 介导。
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Histone code pathway involving H3 S28 phosphorylation and K27 acetylation activates transcription and antagonizes polycomb silencing.组蛋白编码途径涉及 H3 S28 磷酸化和 K27 乙酰化,激活转录并拮抗多梳抑制。
Proc Natl Acad Sci U S A. 2011 Feb 15;108(7):2801-6. doi: 10.1073/pnas.1012798108. Epub 2011 Jan 31.
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Histone H3K27ac separates active from poised enhancers and predicts developmental state.组蛋白 H3K27ac 将活性增强子与 poised 增强子区分开,并预测发育状态。
Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21931-6. doi: 10.1073/pnas.1016071107. Epub 2010 Nov 24.
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Jmjd3 and UTX play a demethylase-independent role in chromatin remodeling to regulate T-box family member-dependent gene expression.Jmjd3 和 UTX 在染色质重塑中发挥去甲基化酶非依赖性作用,以调节 T 盒家族成员依赖性基因表达。
Mol Cell. 2010 Nov 24;40(4):594-605. doi: 10.1016/j.molcel.2010.10.028.
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CHD7 targets active gene enhancer elements to modulate ES cell-specific gene expression.CHD7 靶向活性基因增强子元件,以调节胚胎干细胞特异性基因表达。
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Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes.组蛋白 H3 赖氨酸 27 位甲基化和乙酰化之间拮抗开关的特性及其在 Polycomb 组靶基因转录调控中的作用。
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The H3K27me3 demethylase dUTX is a suppressor of Notch- and Rb-dependent tumors in Drosophila.H3K27me3 去甲基酶 dUTX 是果蝇中 Notch 和 Rb 依赖性肿瘤的抑制因子。
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