Knight Christopher G, Pinney John W
Faculty of Life Sciences, The University of Manchester, Michael Smith Building, Manchester, UK.
Bioessays. 2009 Oct;31(10):1080-90. doi: 10.1002/bies.200900043.
Our understanding of how evolution acts on biological networks remains patchy, as is our knowledge of how that action is best identified, modelled and understood. Starting with network structure and the evolution of protein-protein interaction networks, we briefly survey the ways in which network evolution is being addressed in the fields of systems biology, development and ecology. The approaches highlighted demonstrate a movement away from a focus on network topology towards a more integrated view, placing biological properties centre-stage. We argue that there remains great potential in a closer synergy between evolutionary biology and biological network analysis, although that may require the development of novel approaches and even different analogies for biological networks themselves.
我们对进化如何作用于生物网络的理解仍然不完整,就像我们对如何最好地识别、建模和理解这种作用的认识一样。从网络结构和蛋白质 - 蛋白质相互作用网络的进化开始,我们简要概述了系统生物学、发育生物学和生态学领域中处理网络进化的方式。所强调的方法表明,研究正从专注于网络拓扑结构转向更综合的观点,将生物学特性置于核心地位。我们认为,进化生物学与生物网络分析之间更紧密的协同作用仍有巨大潜力,尽管这可能需要开发新的方法,甚至对生物网络本身采用不同的类比。