Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
PLoS One. 2009 Nov 5;4(11):e7635. doi: 10.1371/journal.pone.0007635.
The non-heme iron(II) dioxygenase family of enzymes contain a common 2-His-1-carboxylate iron-binding motif. These enzymes catalyze a wide variety of oxidative reactions, such as the hydroxylation of aliphatic C-H bonds. Prolyl 4-hydroxylase (P4H) is an alpha-ketoglutarate-dependent iron(II) dioxygenase that catalyzes the post-translational hydroxylation of proline residues in protocollagen strands, stabilizing the ensuing triple helix. Human P4H residues His412, Asp414, and His483 have been identified as an iron-coordinating 2-His-1-carboxylate motif. Enzymes that catalyze oxidative halogenation do so by a mechanism similar to that of P4H. These halogenases retain the active-site histidine residues, but the carboxylate ligand is replaced with a halide ion. We replaced Asp414 of P4H with alanine (to mimic the active site of a halogenase) and with glycine. These substitutions do not, however, convert P4H into a halogenase. Moreover, the hydroxylase activity of D414A P4H cannot be rescued with small molecules. In addition, rearranging the two His and one Asp residues in the active site eliminates hydroxylase activity. Our results demonstrate a high stringency for the iron-binding residues in the P4H active site. We conclude that P4H, which catalyzes an especially demanding chemical transformation, is recalcitrant to change.
非血红素铁(II)双加氧酶家族的酶含有一个常见的 2-His-1-carboxylate 铁结合基序。这些酶催化各种氧化反应,如脂肪族 C-H 键的羟化。脯氨酰 4-羟化酶(P4H)是一种依赖α-酮戊二酸的铁(II)双加氧酶,它催化原胶原链中脯氨酸残基的翻译后羟化,稳定随后的三螺旋结构。已鉴定出人类 P4H 的残基 His412、Asp414 和 His483 为铁配位 2-His-1-carboxylate 基序。催化氧化卤化的酶通过类似于 P4H 的机制进行催化。这些卤化酶保留活性位点的组氨酸残基,但羧酸盐配体被卤素离子取代。我们用丙氨酸(模拟卤化酶的活性位点)和甘氨酸替换 P4H 的 Asp414。然而,这些取代并不能将 P4H 转化为卤化酶。此外,D414A P4H 的羟化酶活性不能用小分子挽救。此外,在活性位点中重新排列两个 His 和一个 Asp 残基消除了羟化酶活性。我们的结果表明 P4H 活性位点的铁结合残基具有高度的严格性。我们得出结论,催化要求特别苛刻的化学转化的 P4H 不易发生变化。