基于并行计算的实时偏振敏感光学相干断层扫描数据处理
Real-time polarization-sensitive optical coherence tomography data processing with parallel computing.
作者信息
Liu Gangjun, Zhang Jun, Yu Lingfeng, Xie Tuqiang, Chen Zhongping
机构信息
Beckman Laser Institute, University of California, Irvine, 1002 Health Sciences Road, Irvine, California 92612, USA.
出版信息
Appl Opt. 2009 Nov 10;48(32):6365-70. doi: 10.1364/AO.48.006365.
Abstract
With the increase of the A-line speed of optical coherence tomography (OCT) systems, real-time processing of acquired data has become a bottleneck. The shared-memory parallel computing technique is used to process OCT data in real time. The real-time processing power of a quad-core personal computer (PC) is analyzed. It is shown that the quad-core PC could provide real-time OCT data processing ability of more than 80 K A-lines per second. A real-time, fiber-based, swept source polarization-sensitive OCT system with 20 K A-line speed is demonstrated with this technique. The real-time 2D and 3D polarization-sensitive imaging of chicken muscle and pig tendon is also demonstrated.
摘要
随着光学相干断层扫描（OCT）系统A线速度的提高，采集数据的实时处理已成为一个瓶颈。采用共享内存并行计算技术对OCT数据进行实时处理。分析了四核个人计算机（PC）的实时处理能力。结果表明，四核PC能够提供每秒超过80K A线的实时OCT数据处理能力。利用该技术展示了一个A线速度为20K的基于光纤的扫频源偏振敏感OCT实时系统。还展示了鸡肌肉和猪肌腱的实时二维和三维偏振敏感成像。
相似文献
1
Real-time polarization-sensitive optical coherence tomography data processing with parallel computing.基于并行计算的实时偏振敏感光学相干断层扫描数据处理
Appl Opt. 2009 Nov 10;48(32):6365-70. doi: 10.1364/AO.48.006365.
2
Minimum-phase-function-based processing in frequency-domain optical coherence tomography systems.频域光学相干断层扫描系统中基于最小相位函数的处理
J Opt Soc Am A Opt Image Sci Vis. 2006 Jul;23(7):1669-77. doi: 10.1364/josaa.23.001669.
3
Real-time quadrature projection complex conjugate resolved Fourier domain optical coherence tomography.实时正交投影复共轭分辨傅里叶域光学相干断层扫描术
Opt Lett. 2006 Aug 15;31(16):2426-8. doi: 10.1364/ol.31.002426.
4
Signal-to-noise ratio study of full-field fourier-domain optical coherence tomography.全场傅里叶域光学相干断层扫描的信噪比研究
Appl Opt. 2005 Dec 20;44(36):7722-9. doi: 10.1364/ao.44.007722.
5
Image enhancement for multilayer information retrieval by using full-field optical coherence tomography.利用全场光学相干断层扫描技术进行多层信息检索的图像增强
Appl Opt. 2006 Aug 10;45(23):5967-75. doi: 10.1364/ao.45.005967.
6
Inverse scattering for optical coherence tomography.光学相干断层扫描的逆散射
J Opt Soc Am A Opt Image Sci Vis. 2006 May;23(5):1027-37. doi: 10.1364/josaa.23.001027.
7
Variables affecting polarization-sensitive optical coherence tomography imaging examined through the modeling of birefringent phantoms.通过双折射体模建模研究影响偏振敏感光学相干断层扫描成像的变量。
J Opt Soc Am A Opt Image Sci Vis. 2005 Feb;22(2):262-71. doi: 10.1364/josaa.22.000262.
8
Characterizing of tissue microstructure with single-detector polarization-sensitive optical coherence tomography.用单探测器偏振敏感光学相干断层扫描技术表征组织微观结构。
Appl Opt. 2006 Jun 20;45(18):4464-79. doi: 10.1364/ao.45.004464.
9
High-speed processing architecture for spectral-domain optical coherence microscopy.用于光谱域光学相干显微镜的高速处理架构。
J Biomed Opt. 2008 Jul-Aug;13(4):044013. doi: 10.1117/1.2960018.
10
A practical approach to eliminate autocorrelation artefacts for volume-rate spectral domain optical coherence tomography.一种消除体速率谱域光学相干断层扫描自相关伪影的实用方法。
Phys Med Biol. 2006 Jun 21;51(12):3231-9. doi: 10.1088/0031-9155/51/12/015. Epub 2006 Jun 6.
引用本文的文献
1
Differentiation of ex vivo human breast tissue using polarization-sensitive optical coherence tomography.使用偏振敏感光学相干断层扫描对离体人乳腺组织进行分化
Biomed Opt Express. 2014 Sep 4;5(10):3417-26. doi: 10.1364/BOE.5.003417. eCollection 2014 Oct 1.
2
Spectral domain optical coherence tomography of multi-MHz A-scan rates at 1310 nm range and real-time 4D-display up to 41 volumes/second.1310纳米波长下多兆赫兹A扫描速率的光谱域光学相干断层扫描以及高达每秒41幅容积的实时4D显示。
Biomed Opt Express. 2012 Dec 1;3(12):3067-86. doi: 10.1364/BOE.3.003067. Epub 2012 Nov 1.
3
Swept source/Fourier domain polarization sensitive optical coherence tomography with a passive polarization delay unit.采用无源偏振延迟单元的扫频源/傅里叶域偏振敏感光学相干断层扫描技术
Opt Express. 2012 Apr 23;20(9):10229-41. doi: 10.1364/OE.20.010229.
4
Polarization-maintaining buffered Fourier domain mode-locked swept source for optical coherence tomography.保偏缓冲傅里叶域锁模扫频源用于光相干断层扫描。
Opt Lett. 2011 Dec 15;36(24):4788-90. doi: 10.1364/OL.36.004788.
5
Real-time bulk-motion-correction free Doppler variance optical coherence tomography for choroidal capillary vasculature imaging.用于脉络膜毛细血管血管成像的实时无整体运动校正的多普勒方差光学相干断层扫描技术
Opt Express. 2011 Feb 14;19(4):3657-66. doi: 10.1364/OE.19.003657.
6
High-speed spectral domain optical coherence tomography using non-uniform fast Fourier transform.使用非均匀快速傅里叶变换的高速光谱域光学相干断层扫描技术。
Biomed Opt Express. 2010 Nov 4;1(5):1309-1319. doi: 10.1364/BOE.1.001309.
7
Graphics processing unit accelerated non-uniform fast Fourier transform for ultrahigh-speed, real-time Fourier-domain OCT.用于超高速、实时傅里叶域光学相干断层扫描的图形处理单元加速非均匀快速傅里叶变换
Opt Express. 2010 Oct 25;18(22):23472-87. doi: 10.1364/OE.18.023472.
8
Real-time 4D signal processing and visualization using graphics processing unit on a regular nonlinear-k Fourier-domain OCT system.在常规非线性-k傅里叶域光学相干断层扫描（OCT）系统上使用图形处理器进行实时4D信号处理和可视化
Opt Express. 2010 May 24;18(11):11772-84. doi: 10.1364/OE.18.011772.
本文引用的文献
1
Polarization Effects in Optical Coherence Tomography of Various Biological Tissues.不同生物组织光学相干断层扫描中的偏振效应
IEEE J Sel Top Quantum Electron. 1999 Jul-Aug;5(4):1200-1204. doi: 10.1109/2944.796347.
2
Polarization-sensitive spectral-domain optical coherence tomography using a single line scan camera.使用单线扫描相机的偏振敏感光谱域光学相干断层扫描术
Opt Express. 2007 Mar 5;15(5):2421-31. doi: 10.1364/oe.15.002421.
3
Single camera based spectral domain polarization sensitive optical coherence tomography.基于单相机的光谱域偏振敏感光学相干断层扫描技术
Opt Express. 2007 Feb 5;15(3):1054-63. doi: 10.1364/oe.15.001054.
4
Fiber-based polarization-sensitive Fourier domain optical coherence tomography using B-scan-oriented polarization modulation method.基于光纤的偏振敏感傅里叶域光学相干断层扫描，采用面向B扫描的偏振调制方法。
Opt Express. 2006 Jul 10;14(14):6502-15. doi: 10.1364/oe.14.006502.
5
Real-time fiber-based multi-functional spectral-domain optical coherence tomography at 1.3 microm.基于光纤的1.3微米实时多功能光谱域光学相干断层扫描技术
Opt Express. 2005 May 30;13(11):3931-44. doi: 10.1364/opex.13.003931.
6
Full range polarization-sensitive Fourier domain optical coherence tomography.全范围偏振敏感傅里叶域光学相干断层扫描术
Opt Express. 2004 Nov 29;12(24):6033-9. doi: 10.1364/opex.12.006033.
7
In vivo high-resolution video-rate spectral-domain optical coherence tomography of the human retina and optic nerve.人体视网膜和视神经的体内高分辨率视频速率光谱域光学相干断层扫描
Opt Express. 2004 Feb 9;12(3):367-76. doi: 10.1364/opex.12.000367.
8
Determination of birefringence and absolute optic axis orientation using polarization-sensitive optical coherence tomography with PM fibers.使用保偏光纤的偏振敏感光学相干断层扫描技术测定双折射和绝对光轴方向。
Opt Express. 2003 Dec 1;11(24):3262-70. doi: 10.1364/oe.11.003262.
9
Sensitivity advantage of swept source and Fourier domain optical coherence tomography.扫频光源和傅里叶域光学相干断层扫描的灵敏度优势。
Opt Express. 2003 Sep 8;11(18):2183-9. doi: 10.1364/oe.11.002183.
10
Real-time multi-functional optical coherence tomography.实时多功能光学相干断层扫描
Opt Express. 2003 Apr 7;11(7):782-93. doi: 10.1364/oe.11.000782.
Zotero 插件