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在易位过程中映射 SecA ATP 酶的多肽相互作用。

Mapping polypeptide interactions of the SecA ATPase during translocation.

机构信息

Howard Hughes Medical Institute and Department of Cell Biology, Harvard Medical School, 240 Longwood Avenue, Boston, MA 02115, USA.

出版信息

Proc Natl Acad Sci U S A. 2009 Dec 8;106(49):20800-5. doi: 10.1073/pnas.0910550106. Epub 2009 Nov 20.

DOI:10.1073/pnas.0910550106
PMID:19933328
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2780316/
Abstract

Many bacterial proteins, including most secretory proteins, are translocated across the plasma membrane by the interplay of the cytoplasmic SecA ATPase and a protein-conducting channel formed by the SecY complex. SecA catalyzes the sequential movement of polypeptide segments through the SecY channel. How SecA interacts with a broad range of polypeptide segments is unclear, but structural data raise the possibility that translocation substrates bind into a "clamp" of SecA. Here, we have used disulfide bridge cross-linking to test this hypothesis. To analyze polypeptide interactions of SecA during translocation, two cysteines were introduced into a translocation intermediate: one that cross-links to the SecY channel and the other one for cross-linking to a cysteine placed at various positions in SecA. Our results show that a translocating polypeptide is indeed captured inside SecA's clamp and moves in an extended conformation through the clamp into the SecY channel. These results define the polypeptide path during SecA-mediated protein translocation and suggest a mechanism by which ATP hydrolysis by SecA is used to move a polypeptide chain through the SecY channel.

摘要

许多细菌蛋白,包括大多数分泌蛋白,都是通过细胞质 SecA ATP 酶和由 SecY 复合物形成的蛋白质传导通道的相互作用跨膜转运的。SecA 催化多肽片段通过 SecY 通道的顺序运动。SecA 如何与广泛的多肽片段相互作用尚不清楚,但结构数据提出了转运底物结合到 SecA“夹”中的可能性。在这里,我们使用二硫键交联来检验这一假设。为了分析 SecA 在转运过程中的多肽相互作用,我们在一个转运中间体内引入了两个半胱氨酸:一个与 SecY 通道交联,另一个与 SecA 中各种位置的半胱氨酸交联。我们的结果表明,一个正在转运的多肽确实被捕获在 SecA 的夹子里,并以伸展构象通过夹子里移动到 SecY 通道。这些结果定义了 SecA 介导的蛋白转运过程中的多肽路径,并提出了一种机制,即通过 SecA 的 ATP 水解来将多肽链通过 SecY 通道移动。

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Mapping polypeptide interactions of the SecA ATPase during translocation.在易位过程中映射 SecA ATP 酶的多肽相互作用。
Proc Natl Acad Sci U S A. 2009 Dec 8;106(49):20800-5. doi: 10.1073/pnas.0910550106. Epub 2009 Nov 20.
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本文引用的文献

1
Conformational flexibility and peptide interaction of the translocation ATPase SecA.转运ATP酶SecA的构象灵活性与肽相互作用
J Mol Biol. 2009 Dec 11;394(4):606-12. doi: 10.1016/j.jmb.2009.10.024. Epub 2009 Oct 20.
2
Conformational transition of Sec machinery inferred from bacterial SecYE structures.从细菌SecYE结构推断出的Sec转运体的构象转变
Nature. 2008 Oct 16;455(7215):988-91. doi: 10.1038/nature07421.
3
A role for the two-helix finger of the SecA ATPase in protein translocation.SecA ATP酶的双螺旋指在蛋白质转运中的作用。
Nature. 2008 Oct 16;455(7215):984-7. doi: 10.1038/nature07439.
4
Structure of a complex of the ATPase SecA and the protein-translocation channel.ATP酶SecA与蛋白质转运通道复合物的结构
Nature. 2008 Oct 16;455(7215):936-43. doi: 10.1038/nature07335.
5
SecA, the motor of the secretion machine, binds diverse partners on one interactive surface.SecA作为分泌机器的动力蛋白,在一个相互作用表面上结合多种伙伴。
J Mol Biol. 2008 Sep 26;382(1):74-87. doi: 10.1016/j.jmb.2008.06.049. Epub 2008 Jun 24.
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Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.蛋白质跨真核生物内质网和细菌质膜的转运
Nature. 2007 Nov 29;450(7170):663-9. doi: 10.1038/nature06384.
7
Structural basis for signal-sequence recognition by the translocase motor SecA as determined by NMR.通过核磁共振确定的转运体马达SecA对信号序列识别的结构基础。
Cell. 2007 Nov 16;131(4):756-69. doi: 10.1016/j.cell.2007.09.039.
8
Protein translocation is mediated by oligomers of the SecY complex with one SecY copy forming the channel.蛋白质转运由SecY复合体的寡聚体介导,其中一个SecY拷贝形成通道。
Cell. 2007 Apr 6;129(1):97-110. doi: 10.1016/j.cell.2007.02.036.
9
Structure of dimeric SecA, the Escherichia coli preprotein translocase motor.大肠杆菌前体蛋白转位酶马达二聚体SecA的结构
J Mol Biol. 2007 Mar 9;366(5):1545-57. doi: 10.1016/j.jmb.2006.12.049. Epub 2006 Dec 23.
10
Contour length and refolding rate of a small protein controlled by engineered disulfide bonds.由工程二硫键控制的小蛋白质的轮廓长度和重折叠速率。
Biophys J. 2007 Jan 1;92(1):225-33. doi: 10.1529/biophysj.106.091561. Epub 2006 Oct 6.