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蛋白酶保护实验表明,多肽通过 SecA ATP 酶的强力冲击进入 SecY 通道。

Protease protection assays show polypeptide movement into the SecY channel by power strokes of the SecA ATPase.

机构信息

Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA.

Department of Cell Biology, Harvard Medical School, Boston, MA, USA.

出版信息

EMBO Rep. 2020 Nov 5;21(11):e50905. doi: 10.15252/embr.202050905. Epub 2020 Sep 24.

DOI:10.15252/embr.202050905
PMID:32969592
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7645225/
Abstract

Bacterial secretory proteins are translocated post-translationally by the SecA ATPase through the protein-conducting SecY channel in the plasma membrane. During the ATP hydrolysis cycle, SecA undergoes large conformational changes of its two-helix finger and clamp domains, but how these changes result in polypeptide movement is unclear. Here, we use a reconstituted purified system and protease protection assays to show that ATP binding to SecA results in a segment of the translocation substrate being pushed into the channel. This motion is prevented by mutation of conserved residues at the finger's tip. Mutation of SecA's clamp causes backsliding of the substrate in the ATP-bound state. Together, these data support a power stroke model of translocation in which, upon ATP binding, the two-helix finger pushes the substrate into the channel, where it is held by the clamp until nucleotide hydrolysis has occurred.

摘要

细菌分泌蛋白通过 SecA ATP 酶在后翻译阶段穿过质膜中的蛋白传导 SecY 通道进行易位。在 ATP 水解循环中,SecA 的双螺旋指和夹子结构域发生了很大的构象变化,但这些变化如何导致多肽运动尚不清楚。在这里,我们使用重组的纯化系统和蛋白酶保护实验证明,ATP 与 SecA 的结合导致易位底物的一段被推入通道。这种运动被位于指状物顶端的保守残基的突变所阻止。SecA 夹子的突变导致在 ATP 结合状态下底物的回溯。这些数据共同支持一种易位的动力冲程模型,即在 ATP 结合后,双螺旋指将底物推入通道,在核苷酸水解发生之前,夹子将其固定在通道中。

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EMBO Rep. 2020 Nov 5;21(11):e50905. doi: 10.15252/embr.202050905. Epub 2020 Sep 24.
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本文引用的文献

1
Structure of the substrate-engaged SecA-SecY protein translocation machine.底物结合的 SecA-SecY 蛋白易位子机器的结构。
Nat Commun. 2019 Jun 28;10(1):2872. doi: 10.1038/s41467-019-10918-2.
2
Single-Molecule Studies on the Protein Translocon.蛋白质转位通道的单分子研究。
Annu Rev Biophys. 2019 May 6;48:185-207. doi: 10.1146/annurev-biophys-052118-115352.
3
Protein translocation by the SecA ATPase occurs by a power-stroke mechanism.SecA ATP 酶的蛋白质易位通过动力冲程机制发生。
EMBO J. 2019 May 2;38(9). doi: 10.15252/embj.2018101140. Epub 2019 Mar 15.
4
ATP-induced asymmetric pre-protein folding as a driver of protein translocation through the Sec machinery.ATP 诱导的不对称前体蛋白折叠作为 Sec 机制驱动蛋白易位的动力。
Elife. 2019 Jan 2;8:e41803. doi: 10.7554/eLife.41803.
5
Toward an understanding of the Cdc48/p97 ATPase.迈向对Cdc48/p97 ATP酶的理解。
F1000Res. 2017 Aug 3;6:1318. doi: 10.12688/f1000research.11683.1. eCollection 2017.
6
Structural and Mechanistic Insights into Protein Translocation.蛋白质易位的结构与机制研究进展
Annu Rev Cell Dev Biol. 2017 Oct 6;33:369-390. doi: 10.1146/annurev-cellbio-100616-060439. Epub 2017 May 31.
7
Two-way communication between SecY and SecA suggests a Brownian ratchet mechanism for protein translocation.SecY和SecA之间的双向通讯表明了一种用于蛋白质转运的布朗棘轮机制。
Elife. 2016 May 16;5:e15598. doi: 10.7554/eLife.15598.
8
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J Mol Biol. 2015 Jul 17;427(14):2348-59. doi: 10.1016/j.jmb.2015.05.003. Epub 2015 May 14.
9
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