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古翅目昆虫东方蜉蝣(蜉蝣目:蜉蝣科)和蓝目天蛾(蜻蜓目:豆娘科)的完整线粒体基因组序列。

The complete mitogenome sequences of the palaeopteran insects Ephemera orientalis (Ephemeroptera: Ephemeridae) and Davidius lunatus (Odonata: Gomphidae).

机构信息

Department of Life Science, Hoseo University, Asan-city, Chungchungnam-do 336-795, Republic of Korea.

出版信息

Genome. 2009 Sep;52(9):810-7. doi: 10.1139/g09-055.

DOI:10.1139/g09-055
PMID:19935929
Abstract

Currently, the palaeopteran lineages (insect orders Ephemeroptera and Odonata) that have a problematic relationship with neopteran lineages are poorly represented by mitogenome sequences. In this study, we have determined the complete mitogenome of the oriental mayfly, Ephemera orientalis (Ephemeroptera: Ephemeridae), and the dragonfly Davidius lunatus (Odonata: Gomphidae). The 16 463 bp mitogenome of E. orientalis and the 15 912 bp mitogenome of D. lunatus have many of the features typically detected in insect mitogenomes. Although the initiation codon for the D. lunatus COI gene is the typical ATA, E. orientalis is unusual in that no typical start codon was detected in the start region of the COI gene. The A+T-rich regions of both mitogenomes have some unusual features. The E. orientalis A+T-rich region harbors two identical 55 bp sequences separated by 158 bp, and the D. lunatus A+T-rich region harbors a tandem repeat comprising two identical 261 bp copies and one partial copy of the repeat. Additionally, the A+T-rich regions of both mitogenomes harbor the stem-and-loop structures flanked by the conserved sequences "TA(A)TA" at the 5' end and "G(A)nT" at the 3' end, which have been suggested to be the signals involved in minor strand replication initiation. Furthermore, the D. lunatus A+T-rich region contains two tRNA-like structures with proper anticodon and cloverleaf structures.

摘要

目前,与新翅目昆虫类群关系存在问题的古翅目(蜉蝣目和蜻蜓目)类群,其线粒体基因组序列的代表性很差。在本研究中,我们测定了东方蜉蝣 Ephemera orientalis(蜉蝣目:蜉蝣科)和蜻蜓 Davidius lunatus(蜻蜓目:蜻蜓科)的完整线粒体基因组。E. orientalis 的 16463 bp 线粒体基因组和 D. lunatus 的 15912 bp 线粒体基因组具有昆虫线粒体基因组中通常检测到的许多特征。尽管 D. lunatus COI 基因的起始密码子是典型的 ATA,但 E. orientalis 不同寻常的是,在 COI 基因的起始区未检测到典型的起始密码子。这两个线粒体基因组的 A+T 富含区都具有一些不寻常的特征。E. orientalis 的 A+T 富含区含有两个相同的 55 bp 序列,由 158 bp 隔开,而 D. lunatus 的 A+T 富含区含有由两个相同的 261 bp 拷贝和一个重复部分组成的串联重复序列。此外,这两个线粒体基因组的 A+T 富含区都含有茎环结构,5' 端为保守序列“TA(A)TA”,3' 端为“G(A)nT”,这被认为是涉及次要链复制起始的信号。此外,D. lunatus 的 A+T 富含区含有两个具有适当反密码子和三叶草结构的 tRNA 样结构。

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