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Mechanistic and structural analyses of the roles of active site residues in yeast polyamine oxidase Fms1: characterization of the N195A and D94N enzymes.酵母多胺氧化酶 Fms1 活性位点残基作用的机制和结构分析:N195A 和 D94N 酶的特性。
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本文引用的文献

1
Oxidation of amines by flavoproteins.黄素蛋白介导的胺类氧化。
Arch Biochem Biophys. 2010 Jan 1;493(1):13-25. doi: 10.1016/j.abb.2009.07.019. Epub 2009 Aug 3.
2
pH dependence of a mammalian polyamine oxidase: insights into substrate specificity and the role of lysine 315.哺乳动物多胺氧化酶的pH依赖性:对底物特异性及赖氨酸315作用的深入了解
Biochemistry. 2009 Feb 24;48(7):1508-16. doi: 10.1021/bi802227m.
3
Structural insights into the mechanism of amine oxidation by monoamine oxidases A and B.对单胺氧化酶A和B氧化胺类机制的结构见解。
Arch Biochem Biophys. 2007 Aug 15;464(2):269-76. doi: 10.1016/j.abb.2007.05.006. Epub 2007 May 30.
4
Insights into the mechanism of flavoprotein-catalyzed amine oxidation from nitrogen isotope effects on the reaction of N-methyltryptophan oxidase.通过氮同位素效应研究N-甲基色氨酸氧化酶反应对黄素蛋白催化胺氧化机制的深入了解。
Biochemistry. 2007 Jun 26;46(25):7655-64. doi: 10.1021/bi700482h. Epub 2007 Jun 2.
5
Mechanistic studies of the flavoenzyme tryptophan 2-monooxygenase: deuterium and 15N kinetic isotope effects on alanine oxidation by an L-amino acid oxidase.黄素酶色氨酸2-单加氧酶的机制研究:氘和15N动力学同位素效应作用于L-氨基酸氧化酶对丙氨酸的氧化反应
Biochemistry. 2006 Dec 26;45(51):15844-52. doi: 10.1021/bi061894o.
6
Spermine oxidase SMO(PAOh1), Not N1-acetylpolyamine oxidase PAO, is the primary source of cytotoxic H2O2 in polyamine analogue-treated human breast cancer cell lines.精胺氧化酶SMO(PAOh1)而非N1-乙酰多胺氧化酶PAO,是多胺类似物处理的人乳腺癌细胞系中细胞毒性过氧化氢的主要来源。
J Biol Chem. 2005 Dec 2;280(48):39843-51. doi: 10.1074/jbc.M508177200. Epub 2005 Oct 5.
7
Mechanistic studies of mouse polyamine oxidase with N1,N12-bisethylspermine as a substrate.以N1,N12-双乙基精胺为底物对小鼠多胺氧化酶的机制研究
Biochemistry. 2005 May 10;44(18):7079-84. doi: 10.1021/bi050347k.
8
Crystal structures of Fms1 and its complex with spermine reveal substrate specificity.Fms1及其与精胺复合物的晶体结构揭示了底物特异性。
J Mol Biol. 2005 May 13;348(4):951-9. doi: 10.1016/j.jmb.2005.03.008.
9
pH and kinetic isotope effects on sarcosine oxidation by N-methyltryptophan oxidase.pH值和动力学同位素效应对N-甲基色氨酸氧化酶催化肌氨酸氧化的影响。
Biochemistry. 2005 Mar 1;44(8):3074-81. doi: 10.1021/bi047716h.
10
Chemical aspects of amine oxidation by flavoprotein enzymes.黄素蛋白酶催化胺氧化的化学过程
Nat Prod Rep. 2004 Dec;21(6):722-30. doi: 10.1039/b306788m. Epub 2004 Oct 20.

人精脒氧化酶的机制研究:动力学机制和 pH 效应。

Mechanistic studies of human spermine oxidase: kinetic mechanism and pH effects.

机构信息

Department of Biochemistry and Center for Biomedical Neuroscience, University of Texas Health Science Center, San Antonio, Texas 78229, USA.

出版信息

Biochemistry. 2010 Jan 19;49(2):386-92. doi: 10.1021/bi9017945.

DOI:10.1021/bi9017945
PMID:20000632
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2810717/
Abstract

In mammalian cells, the flavoprotein spermine oxidase (SMO) catalyzes the oxidation of spermine to spermidine and 3-aminopropanal. Mechanistic studies have been conducted with the recombinant human enzyme. The initial velocity pattern in which the ratio between the concentrations of spermine and oxygen is kept constant establishes the steady-state kinetic pattern as ping-pong. Reduction of SMO by spermine in the absence of oxygen is biphasic. The rate constant for the rapid phase varies with the substrate concentration, with a limiting value (k(3)) of 49 s(-1) and an apparent K(d) value of 48 microM at pH 8.3. The rate constant for the slow step is independent of the spermine concentration, with a value of 5.5 s(-1), comparable to the k(cat) value of 6.6 s(-1). The kinetics of the oxidative half-reaction depend on the aging time after the spermine and enzyme are mixed in a double-mixing experiment. At an aging time of 6 s, the reaction is monophasic with a second-order rate constant of 4.2 mM(-1) s(-1). At an aging time of 0.3 s, the reaction is biphasic with two second-order constants equal to 4.0 and 40 mM(-1) s(-1). Neither is equal to the k(cat)/K(O(2)) value of 13 mM(-1) s(-1). These results establish the existence of more than one pathway for the reaction of the reduced flavin intermediate with oxygen. The k(cat)/K(M) value for spermine exhibits a bell-shaped pH profile, with an average pK(a) value of 8.3. This profile is consistent with the active form of spermine having three charged nitrogens. The pH profile for k(3) shows a pK(a) value of 7.4 for a group that must be unprotonated. The pK(i)-pH profiles for the competitive inhibitors N,N'-dibenzylbutane-1,4-diamine and spermidine show that the fully protonated forms of the inhibitors and the unprotonated form of an amino acid residue with a pK(a) of approximately 7.4 in the active site are preferred for binding.

摘要

在哺乳动物细胞中,黄素蛋白亚精胺氧化酶(SMO)催化亚精胺氧化为精脒和 3-氨基丙醛。已经对重组人酶进行了机制研究。在保持亚精胺和氧浓度比恒定的初始速度模式下,建立了乒乓稳态动力学模式。在没有氧的情况下,SMO 被亚精胺还原是两相的。快速相的速率常数随底物浓度而变化,在 pH8.3 时,其极限值(k(3))为 49 s(-1),表观 K(d)值为 48 μM。慢步骤的速率常数与亚精胺浓度无关,值为 5.5 s(-1),与 6.6 s(-1)的 k(cat)值相当。氧化半反应的动力学取决于在双混合实验中混合亚精胺和酶后的老化时间。在老化时间为 6 s 时,反应是单相的,二级反应常数为 4.2 mM(-1) s(-1)。在老化时间为 0.3 s 时,反应是两相的,两个二级常数等于 4.0 和 40 mM(-1) s(-1)。两者都不等于 13 mM(-1) s(-1)的 k(cat)/K(O(2))值。这些结果表明,还原黄素中间产物与氧反应存在不止一条途径。亚精胺的 k(cat)/K(M)值呈现钟形 pH 曲线,平均 pK(a)值为 8.3。该曲线与具有三个带电荷氮的活性亚精胺一致。k(3)的 pH 曲线显示出 pK(a)值为 7.4 的基团必须是非质子化的。竞争性抑制剂 N,N'-二苄基丁烷-1,4-二胺和精脒的 pK(i)-pH 曲线表明,抑制剂的全质子化形式和活性位点中 pK(a)约为 7.4 的氨基酸残基的非质子化形式是首选的结合形式。