Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.
FEMS Microbiol Ecol. 2010 Feb;71(2):218-25. doi: 10.1111/j.1574-6941.2009.00811.x. Epub 2009 Nov 6.
Acetate is the most important intermediate in anaerobic degradation of organic matter. The carbon isotope effects associated with the oxidation of acetate (epsilon(ac)) were examined for four acetotrophic sulfur reducers, Desulfuromonas acetoxidans, Desulfuromonas thiophila, Desulfurella acetivorans, and Hippea maritima. During the consumption of acetate and sulfur, acetate was enriched in (13)C by 11.5 and 11.2 per thousand in Desulfuromonas acetoxidans and Desulfuromonas thiophila, respectively. By contrast, isotope fractionation in D. acetivorans and H. maritima resulted in isotope enrichment factors of epsilon(ac)=-6.3 per thousand and -8.4 per thousand, respectively. These sulfur-reducing bacteria all metabolize acetate via the tricarboxylic acid cycle, but have different mechanisms for the initial activation of acetate. In Desulfuromonas acetoxidans, acetyl-CoA is formed by succinyl-CoA : acetate-CoA-transferase, and in D. acetivorans by acetate kinase and phosphate acetyltransferase. Hence, values of epsilon(ac) seem to be characteristic for the type of activation of acetate to acetyl-CoA in acetotrophic sulfur reducers. Summarizing epsilon(ac)-values in anaerobic acetotrophic microorganisms, it appears that isotope fractionation depends on the mechanism of acetate activation to acetyl-CoA, on the key enzyme of the acetate dissimilation pathway, and on the bioavailability of acetate, which all have to be considered when using delta(13)C of acetate in environmental samples for diagnosis of the involved microbial populations.
醋酸盐是有机物质厌氧降解过程中的最重要的中间产物。本文对四种乙酸营养型硫还原菌(脱硫醋酸单胞菌、脱硫硫杆菌、脱硫脱硫弧菌和海栖热袍菌)氧化醋酸盐的碳同位素效应(ε(ac))进行了研究。在消耗醋酸盐和硫的过程中,醋酸盐在脱硫醋酸单胞菌和脱硫硫杆菌中分别富集了(13)C11.5‰和11.2‰。相比之下,在脱硫脱硫弧菌和海栖热袍菌中,同位素分馏导致ε(ac)值分别为-6.3‰和-8.4‰。这些硫还原菌均通过三羧酸循环代谢醋酸盐,但醋酸盐的初始激活机制不同。在脱硫醋酸单胞菌中,乙酰辅酶 A 通过琥珀酰辅酶 A:醋酸盐辅酶 A-转移酶形成,而在脱硫脱硫弧菌中通过醋酸激酶和磷酸乙酰转移酶形成。因此,ε(ac)值似乎是乙酸营养型硫还原菌中乙酰辅酶 A 激活类型的特征。总结厌氧乙酸营养微生物的ε(ac)值,表明同位素分馏取决于将醋酸盐激活为乙酰辅酶 A 的机制、醋酸盐异化途径的关键酶以及醋酸盐的生物利用度,在使用环境样品中醋酸盐的δ(13)C 来诊断相关微生物种群时,这些因素都需要考虑。