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豪猪弓形杆菌属,新属,新种,从野猪粪便中分离得到,与肠杆菌目和巴斯德菌目成员最为密切相关。

Orbus hercynius gen. nov., sp. nov., isolated from faeces of wild boar, is most closely related to members of the orders 'Enterobacteriales' and Pasteurellales.

机构信息

Robert Koch-Institute, Wernigerode Branch, Burgstr. 37, D-38855 Wernigerode, Germany.

Robert Koch-Institute, ZBS 4, Nordufer 20, D-13353 Berlin, Germany.

出版信息

Int J Syst Evol Microbiol. 2010 Nov;60(Pt 11):2601-2605. doi: 10.1099/ijs.0.019026-0. Epub 2009 Dec 18.

DOI:10.1099/ijs.0.019026-0
PMID:20023064
Abstract

A novel gammaproteobacterium, strain CN3(T), was isolated from the faeces of wild boar. Strain CN3(T) was facultatively anaerobic and appeared coccoid or rod-shaped. The partial 16S rRNA gene sequence determined for strain CN3(T) suggested a distant relationship with members of the orders 'Enterobacteriales' and Pasteurellales. The gene sequence showed highest similarity (90.3 %) with Obesumbacterium proteus DSM 2777(T), a member of the family Enterobacteriaceae. The closest relatives outside the order 'Enterobacteriales' according to 16S rRNA gene sequence analysis were members of the order Pasteurellales with 88.7 % similarity (Mannheimia haemolytica NCTC 9380(T) and Actinobacillus lignieresii NCTC 4189(T)). In contrast to most members of the order 'Enterobacteriales', strain CN3(T) was oxidase-positive. The pattern of fatty acids, in particular the high relative abundance of C(18 : 1)ω7c (38.5 %), was clearly distinct from the conserved pattern found for members of the order Pasteurellales. EcoRI ribotyping of strain CN3(T) yielded no significant similarity to existing database entries. The major ubiquinone of strain CN3(T) was Q-8. The DNA G+C content was 36.4 mol%. Strain CN3(T) hosted a phage and secreted considerable amounts of three proteins into the culture supernatant. A spontaneous mutant of strain CN3(T) was isolated which formed long filaments. Microscopic studies revealed the presence of a capsule that the mutant strain was unable to partition after cell division. Strain CN3(T) thus represents a novel species within a new genus, for which the name Orbus hercynius gen. nov., sp. nov. is proposed. The type strain of the type species is CN3(T) (=DSM 22228(T)=CCUG 57622(T)). Classification of the novel species to the family and order level will require further investigations.

摘要

一株新型γ-变形杆菌,菌株 CN3(T),从野猪粪便中分离得到。菌株 CN3(T) 为兼性厌氧菌,呈球形或杆状。菌株 CN3(T) 的部分 16S rRNA 基因序列表明,其与肠杆菌目和巴氏杆菌目的成员关系较远。基因序列与肠杆菌科的 Obesumbacterium proteus DSM 2777(T) 相似度最高(90.3%)。根据 16S rRNA 基因序列分析,与肠杆菌目以外的最接近的亲缘关系是巴氏杆菌目的成员,相似度为 88.7%(Mannheimia haemolytica NCTC 9380(T) 和 Actinobacillus lignieresii NCTC 4189(T))。与大多数肠杆菌目成员不同,菌株 CN3(T) 氧化酶阳性。脂肪酸模式,特别是 C(18 : 1)ω7c(38.5%)的相对丰度较高,与巴氏杆菌目成员的保守模式明显不同。菌株 CN3(T) 的 EcoRI 核糖体分型与现有数据库条目没有显著相似性。菌株 CN3(T) 的主要类脂醌为 Q-8。DNA G+C 含量为 36.4 mol%。菌株 CN3(T) 携带噬菌体,并在培养上清液中分泌大量三种蛋白。从菌株 CN3(T) 中分离出一个自发突变株,该突变株形成长丝。显微镜研究表明存在一个荚膜,突变株在细胞分裂后无法分隔。因此,菌株 CN3(T) 代表了一个新属中的一个新种,建议使用 Orbus hercynius gen. nov.,sp. nov. 来命名这个新种。模式种的模式菌株为 CN3(T)(=DSM 22228(T)=CCUG 57622(T))。将新型物种分类到科和目水平还需要进一步的研究。

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