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本文引用的文献

1
Over-expression and localization of a host protein on the membrane of Cryptosporidium parvum infected epithelial cells.一种宿主蛋白在微小隐孢子虫感染的上皮细胞膜上的过表达及定位
Mol Biochem Parasitol. 2009 Nov;168(1):95-101. doi: 10.1016/j.molbiopara.2009.07.004. Epub 2009 Jul 22.
2
Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling.用于全基因组表达谱分析的皮克级总RNA扩增方法的评估
BMC Genomics. 2009 May 26;10:246. doi: 10.1186/1471-2164-10-246.
3
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.利用DAVID生物信息学资源对大型基因列表进行系统和综合分析。
Nat Protoc. 2009;4(1):44-57. doi: 10.1038/nprot.2008.211.
4
Biphasic modulation of apoptotic pathways in Cryptosporidium parvum-infected human intestinal epithelial cells.微小隐孢子虫感染的人肠上皮细胞中凋亡途径的双相调节
Infect Immun. 2009 Feb;77(2):837-49. doi: 10.1128/IAI.00955-08. Epub 2008 Dec 15.
5
Generation of a non-small cell lung cancer transcriptome microarray.非小细胞肺癌转录组微阵列的生成。
BMC Med Genomics. 2008 May 30;1:20. doi: 10.1186/1755-8794-1-20.
6
Detection of epithelial-cell injury, and quantification of infection, in the HCT-8 organoid model of cryptosporidiosis.隐孢子虫病HCT - 8类器官模型中上皮细胞损伤的检测及感染定量
J Infect Dis. 2008 Jul 1;198(1):143-9. doi: 10.1086/588819.
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Complementary RNA amplification methods enhance microarray identification of transcripts expressed in the C. elegans nervous system.互补RNA扩增方法增强了对秀丽隐杆线虫神经系统中表达的转录本的微阵列鉴定。
BMC Genomics. 2008 Feb 19;9:84. doi: 10.1186/1471-2164-9-84.
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Integrated genomic profiling of chronic lymphocytic leukemia identifies subtypes of deletion 13q14.慢性淋巴细胞白血病的综合基因组分析确定了13q14缺失的亚型。
Cancer Res. 2008 Feb 15;68(4):1012-21. doi: 10.1158/0008-5472.CAN-07-3105.
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The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists.DAVID基因功能分类工具:一种以生物模块为中心的新型算法,用于对大型基因列表进行功能分析。
Genome Biol. 2007;8(9):R183. doi: 10.1186/gb-2007-8-9-r183.

细胞分选辅助微阵列分析隐孢子虫感染宿主细胞的反应。

Cell sorting-assisted microarray profiling of host cell response to Cryptosporidium parvum infection.

机构信息

Tufts Cummings School of Veterinary Medicine, Division of Infectious Diseases, North Grafton, MA 01536, USA.

出版信息

Infect Immun. 2010 Mar;78(3):1040-8. doi: 10.1128/IAI.01009-09. Epub 2009 Dec 28.

DOI:10.1128/IAI.01009-09
PMID:20038534
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2825902/
Abstract

To study the transcriptional response of mammalian cells to infection with the intracellular apicomplexan parasite Cryptosporidium parvum, infected and uninfected cells were recovered from C. parvum-infected cell monolayers. This approach, which contrasts with a more conventional experimental design that compares infected to uninfected cell monolayers, enabled the identification of functional categories of genes that are differentially transcribed as a direct consequence of the presence of intracellular parasites. Among several categories of upregulated genes, glycoprotein metabolism was significantly overrepresented. To investigate whether these transcriptional changes affected the composition of the surface of infected cells, cells were probed with fluorescently labeled lectins. Among a panel of seven lectins, soybean agglutinin, which recognizes N-acetyl-d-galactosamine, generated the largest difference in fluorescence between infected and uninfected cells. The origin of the fluorescent signal emitted by infected cells was further investigated and attributed to the overexpression of glycoprotein on the surface of infected cells, as well as the presence of glycoprotein located in the proximity of intracellular parasites.

摘要

为了研究哺乳动物细胞对细胞内顶复门寄生虫微小隐孢子虫感染的转录反应,从微小隐孢子虫感染的细胞单层中回收感染和未感染的细胞。与更传统的实验设计相比,这种方法将感染细胞与未感染细胞单层进行比较,能够鉴定出因细胞内寄生虫的存在而差异转录的功能类别基因。在几个上调基因类别中,糖蛋白代谢显著过表达。为了研究这些转录变化是否影响感染细胞表面的组成,用荧光标记的凝集素探测细胞。在一组七种凝集素中,大豆凝集素识别 N-乙酰-d-半乳糖胺,在感染细胞和未感染细胞之间产生最大的荧光差异。进一步研究了感染细胞发出的荧光信号的来源,并归因于感染细胞表面糖蛋白的过度表达,以及位于细胞内寄生虫附近的糖蛋白的存在。