Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, 240 Longwood Ave, Boston, Massachusetts 02115, USA.
J Am Chem Soc. 2010 Jan 27;132(3):926-7. doi: 10.1021/ja9097862.
Genome mining and identification of natural product gene clusters typically relies on the presence of canonical nonribosomal polypeptide synthetase (NRPS) or polyketide synthase (PKS) domains. Recently, other condensation enzymes, such as the ATP-grasp ligases, have been recognized as important players in natural product biosynthesis. In this study, sequence based searching for homologues of DdaF, the ATP-grasp amide ligase from dapdiamide biosynthesis, led to the identification of a previously unannotated biosynthetic gene cluster in Pseudoalteromonas tunicata. Heterologous expression of the cluster in Escherichia coli allowed for the production and structure determination of two new 3-formyl tyrosine metabolites.
基因组挖掘和天然产物基因簇的鉴定通常依赖于典型的非核糖体多肽合成酶(NRPS)或聚酮合酶(PKS)结构域的存在。最近,其他缩合酶,如 ATP-抓握连接酶,已被认为是天然产物生物合成的重要参与者。在这项研究中,基于序列搜索 dapdiamide 生物合成中的 ATP-抓握酰胺连接酶 DdaF 的同源物,导致了在假交替单胞菌中鉴定出一个以前未注释的生物合成基因簇。该簇在大肠杆菌中的异源表达允许生产和结构确定两种新的 3-甲酰酪氨酸代谢物。