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本文引用的文献

1
Evaluation of a method to identify and categorize section headers in clinical documents.评估一种识别和分类临床文档中标题的方法。
J Am Med Inform Assoc. 2009 Nov-Dec;16(6):806-15. doi: 10.1197/jamia.M3037. Epub 2009 Aug 28.
2
Development and evaluation of a clinical note section header terminology.临床记录部分标题术语的开发与评估
AMIA Annu Symp Proc. 2008 Nov 6;2008:156-60.
3
Extracting structured medication event information from discharge summaries.从出院小结中提取结构化用药事件信息。
AMIA Annu Symp Proc. 2008 Nov 6;2008:237-41.
4
Identifying QT prolongation from ECG impressions using a general-purpose Natural Language Processor.使用通用自然语言处理器从心电图印象中识别QT间期延长。
Int J Med Inform. 2009 Apr;78 Suppl 1(Suppl 1):S34-42. doi: 10.1016/j.ijmedinf.2008.09.001. Epub 2008 Oct 19.
5
Assessment of commercial NLP engines for medication information extraction from dictated clinical notes.评估用于从口述临床记录中提取用药信息的商用自然语言处理引擎。
Int J Med Inform. 2009 Apr;78(4):284-91. doi: 10.1016/j.ijmedinf.2008.08.006. Epub 2008 Oct 5.
6
Use of natural language programming to extract medication from unstructured electronic medical records.使用自然语言编程从非结构化电子病历中提取用药信息。
AMIA Annu Symp Proc. 2007 Oct 11:908.
7
Extraction and mapping of drug names from free text to a standardized nomenclature.从自由文本中提取药物名称并将其映射到标准化命名法。
AMIA Annu Symp Proc. 2007 Oct 11;2007:438-42.
8
Medication reconciliation using natural language processing and controlled terminologies.使用自然语言处理和受控术语进行用药核对。
Stud Health Technol Inform. 2007;129(Pt 1):679-83.
9
Design and implementation of an application and associated services to support interdisciplinary medication reconciliation efforts at an integrated healthcare delivery network.设计并实施一个应用程序及相关服务,以支持综合医疗服务网络中的跨学科用药核对工作。
J Am Med Inform Assoc. 2006 Nov-Dec;13(6):581-92. doi: 10.1197/jamia.M2142.
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Extracting principal diagnosis, co-morbidity and smoking status for asthma research: evaluation of a natural language processing system.提取用于哮喘研究的主要诊断、合并症和吸烟状况:自然语言处理系统的评估
BMC Med Inform Decis Mak. 2006 Jul 26;6:30. doi: 10.1186/1472-6947-6-30.

MedEx:一个用于临床叙述的药物信息提取系统。

MedEx: a medication information extraction system for clinical narratives.

机构信息

Department of Biomedical Informatics, Vanderbilt University, School of Medicine, Nashville, Tennessee 37232, USA.

出版信息

J Am Med Inform Assoc. 2010 Jan-Feb;17(1):19-24. doi: 10.1197/jamia.M3378.

DOI:10.1197/jamia.M3378
PMID:20064797
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2995636/
Abstract

Medication information is one of the most important types of clinical data in electronic medical records. It is critical for healthcare safety and quality, as well as for clinical research that uses electronic medical record data. However, medication data are often recorded in clinical notes as free-text. As such, they are not accessible to other computerized applications that rely on coded data. We describe a new natural language processing system (MedEx), which extracts medication information from clinical notes. MedEx was initially developed using discharge summaries. An evaluation using a data set of 50 discharge summaries showed it performed well on identifying not only drug names (F-measure 93.2%), but also signature information, such as strength, route, and frequency, with F-measures of 94.5%, 93.9%, and 96.0% respectively. We then applied MedEx unchanged to outpatient clinic visit notes. It performed similarly with F-measures over 90% on a set of 25 clinic visit notes.

摘要

药物信息是电子病历中最重要的临床数据类型之一。它对于医疗保健的安全性和质量,以及使用电子病历数据的临床研究至关重要。然而,药物数据通常在临床记录中以自由文本的形式记录。因此,它们无法被其他依赖编码数据的计算机化应用程序访问。我们描述了一种新的自然语言处理系统(MedEx),它可以从临床记录中提取药物信息。MedEx 最初是使用出院小结开发的。使用 50 份出院小结的数据集进行的评估表明,它不仅可以很好地识别药物名称(F 度量值为 93.2%),还可以很好地识别签名信息,如强度、途径和频率,其 F 度量值分别为 94.5%、93.9%和 96.0%。然后,我们将 MedEx 不变地应用于门诊就诊记录。在一组 25 份就诊记录上,其 F 度量值超过 90%,性能相似。