BamView：在参考序列的上下文中查看映射的读取比对数据。
BamView: viewing mapped read alignment data in the context of the reference sequence.
机构信息
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
出版信息
Bioinformatics. 2010 Mar 1;26(5):676-7. doi: 10.1093/bioinformatics/btq010. Epub 2010 Jan 12.
SUMMARY
BamView is an interactive Java application for visualizing the large amounts of data stored for sequence reads which are aligned against a reference genome sequence. It supports the BAM (Binary Alignment/Map) format. It can be used in a number of contexts including SNP calling and structural annotation. BamView has also been integrated into Artemis so that the reads can be viewed in the context of the nucleotide sequence and genomic features.
AVAILABILITY
BamView and Artemis are freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at: http://bamview.sourceforge.net/
摘要
BamView 是一个用于可视化针对参考基因组序列进行比对的序列读取所存储的大量数据的交互式 Java 应用程序。它支持 BAM（二进制比对/映射）格式。它可用于多种情况，包括 SNP 调用和结构注释。BamView 也已集成到 Artemis 中，以便可以在核苷酸序列和基因组特征的上下文中查看读取内容。
可用性
BamView 和 Artemis 可免费（根据 GPL 许可证）下载（适用于 MacOSX、UNIX 和 Windows），网址为：http://bamview.sourceforge.net/
Zotero 插件