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磷酸丙糖异构酶中的亲电催化作用:组氨酸-95的作用

Electrophilic catalysis in triosephosphate isomerase: the role of histidine-95.

作者信息

Komives E A, Chang L C, Lolis E, Tilton R F, Petsko G A, Knowles J R

机构信息

Department of Chemistry, Harvard University, Cambridge, Massachusetts 02138.

出版信息

Biochemistry. 1991 Mar 26;30(12):3011-9. doi: 10.1021/bi00226a005.

DOI:10.1021/bi00226a005
PMID:2007138
Abstract

Electrophilic catalysis by histidine-95 in triosephosphate isomerase has been probed by using Fourier transform infrared spectroscopy and X-ray crystallography. The carbonyl stretching frequency of dihydroxyacetone phosphate bound to the wild-type enzyme is known to be 19 cm-1 lower (at 1713 cm-1) than that of dihydroxyacetone phosphate free in solution (at 1732 cm-1), and this decrease in stretching frequency has been ascribed to an enzymic electrophile that polarizes the substrate carbonyl group toward the transition state for the enolization. Infrared spectra of substrate bound to two site-directed mutants of yeast triosephosphate isomerase in which histidine-95 has been changed to glutamine or to asparagine show unperturbed carbonyl stretching frequencies between 1732 and 1742 cm-1. The lack of carbonyl polarization when histidine-95 is removed suggests that histidine-95 is indeed the catalytic electrophile, at least for dihydroxyacetone phosphate. Kinetic studies of the glutamine mutant (H95Q) have shown that the enzyme follows a subtly different mechanism of proton transfers involving only a single acid-base catalytic group. These findings suggest an additional role for histidine-95 as a general acid-base catalyst in the wild-type enzyme. The X-ray crystal structure of the H95Q mutant with an intermediate analogue, phosphoglycolohydroxamate, bound at the active site has been solved to 2.8-A resolution, and this structure clearly implicates glutamate-165, the catalytic base in the wild-type isomerase, as the sole acid-base catalyst for the mutant enzyme.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

通过傅里叶变换红外光谱和X射线晶体学研究了磷酸丙糖异构酶中组氨酸-95的亲电催化作用。已知与野生型酶结合的磷酸二羟丙酮的羰基伸缩频率比溶液中游离的磷酸二羟丙酮低19 cm-1(在1713 cm-1处),而溶液中游离的磷酸二羟丙酮的羰基伸缩频率为1732 cm-1,这种伸缩频率的降低归因于一种酶亲电试剂,它使底物羰基向烯醇化的过渡态极化。与酵母磷酸丙糖异构酶的两个定点突变体结合的底物的红外光谱显示,其中组氨酸-95已被改变为谷氨酰胺或天冬酰胺,羰基伸缩频率在1732至1742 cm-1之间未受干扰。当组氨酸-95被去除时羰基缺乏极化,这表明组氨酸-95确实是催化亲电试剂,至少对于磷酸二羟丙酮是如此。对谷氨酰胺突变体(H95Q)的动力学研究表明,该酶遵循一种稍有不同的质子转移机制,仅涉及一个酸碱催化基团。这些发现表明组氨酸-95在野生型酶中作为一般酸碱催化剂具有额外的作用。已解析了H95Q突变体与中间类似物磷酸甘氨酰羟肟酸结合在活性位点的X射线晶体结构,分辨率为2.8埃,该结构清楚地表明谷氨酸-165是野生型异构酶中的催化碱,是突变体酶的唯一酸碱催化剂。(摘要截短至250字)

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