Suppr超能文献

Conformational relaxation of a low-temperature protein as probed by photochemical hole burning. Horseradish peroxidase.

作者信息

Zollfrank J, Friedrich J, Vanderkooi J M, Fidy J

机构信息

Institut für Physikalische Chemie, Johannes Gutenberg-Universität, Mainz, Federal Republic of Germany.

出版信息

Biophys J. 1991 Feb;59(2):305-12. doi: 10.1016/S0006-3495(91)82224-X.

Abstract

For the first time, conformational relaxation processes have been measured in a small protein, mesoporphyrin-horseradish peroxidase via their influence on spectral diffusion broadening of holes burnt in the fluorescence excitation spectrum of free base mesoporphyrin. Holes were burnt in three 0----0 bands of different tautomeric forms of the chromophore at 1.5 and 4 K, and the spectral diffusion broadening was measured in temperature cycling experiments between 4 and 30 K. The inhomogeneous linewidth for the tautomeric 0----0 bands was estimated to be 60-70 cm-1; the hole width was found narrow, being in the order of 350 MHz (10(-2) cm-1) at 1.5 K what allowed for an extremely sensitive detection of the conformational changes. Though proteins have many features in common with glasses, the spectral diffusion broadening of photochemical holes under temperature cycling conditions in mesoporphyrin horseradish peroxidase has a very different pattern as a function of temperature. Up to 12 K, the linewidth did not significantly change, then around 14 K; a steplike broadening was observed for all three tautomers, although to a different extent. The total magnitude of line broadening up to 30 K was large and also different for the tautomers. We argue that the difference between the behavior of this protein and that of glassy matrices originate from finite size effects; the protein may be characterized by a small number of TLS, and their distribution may bear discrete features.

摘要

相似文献

2
Energy selection is not correlated in the Qx and Qy bands of a Mg-porphyrin embedded in a protein.
Biophys J. 2001 Jan;80(1):498-504. doi: 10.1016/S0006-3495(01)76032-8.
4
Energy landscape of the tautomer states of mesoporphyrin embedded in horseradish peroxidase.
Biophys J. 1995 Aug;69(2):577-82. doi: 10.1016/S0006-3495(95)79931-3.
5
Spectral hole burning and selection of conformational substates in chromoproteins.
Proc Natl Acad Sci U S A. 1994 Feb 1;91(3):1029-33. doi: 10.1073/pnas.91.3.1029.
7
Trehalose effect on low temperature protein dynamics: fluctuation and relaxation phenomena.
Biophys J. 2001 Apr;80(4):2011-7. doi: 10.1016/S0006-3495(01)76171-1.
10
Terrylene in hexadecane revisited: a hole burning study.
J Chem Phys. 2007 Aug 28;127(8):084510. doi: 10.1063/1.2768960.

引用本文的文献

1
Cryoradiolysis and cryospectroscopy for studies of heme-oxygen intermediates in cytochromes p450.
Methods Mol Biol. 2012;875:375-91. doi: 10.1007/978-1-61779-806-1_20.
2
Softening of the packing density of horseradish peroxidase by a H-donor bound near the heme pocket.
Biophys J. 1992 Dec;63(6):1605-12. doi: 10.1016/S0006-3495(92)81749-6.
3
Spectroscopic properties of reaction center pigments in photosystem II core complexes: revision of the multimer model.
Biophys J. 2008 Jul;95(1):105-19. doi: 10.1529/biophysj.107.123935. Epub 2008 Mar 13.
4
Aging dynamics in globular proteins: summary and analysis of experimental results and simulation by a modified trap model.
Eur Biophys J. 2004 Feb;33(1):68-75. doi: 10.1007/s00249-003-0346-3. Epub 2003 Sep 3.
7
The photoexcited triplet state as a probe of chromophore-protein interaction in myoglobin.
Biophys J. 1998 Sep;75(3):1491-502. doi: 10.1016/S0006-3495(98)74068-8.
8
Electron transfer and protein dynamics in the photosynthetic reaction center.
Biophys J. 1998 May;74(5):2567-87. doi: 10.1016/S0006-3495(98)77964-0.
9
Spectral diffusion and the energy landscape of a protein.
Proc Natl Acad Sci U S A. 1996 Dec 24;93(26):15141-5. doi: 10.1073/pnas.93.26.15141.
10
Stark-effect experiments on photochemical holes in chromoproteins: protoporphyrin IX-substituted myoglobin.
Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):2116-20. doi: 10.1073/pnas.92.6.2116.

本文引用的文献

1
Distribution of barrier heights in amorphous organic materials.
Phys Rev Lett. 1987 Nov 9;59(19):2199-2202. doi: 10.1103/PhysRevLett.59.2199.
2
Thermal irreversibility in optically labeled low-temperature glasses.
Phys Rev B Condens Matter. 1989 Mar 15;39(8):5414-5424. doi: 10.1103/physrevb.39.5414.
3
Optical linewidths and photon-echo decays of impurities in glasses.
Phys Rev B Condens Matter. 1987 Aug 15;36(6):3436-3441. doi: 10.1103/physrevb.36.3436.
4
The internal dynamics of globular proteins.
CRC Crit Rev Biochem. 1981;9(4):293-349. doi: 10.3109/10409238109105437.
5
Low-frequency vibrations of helical structures in protein molecules.
Biochem J. 1983 Mar 1;209(3):573-80. doi: 10.1042/bj2090573.
6
Low-frequency motions in protein molecules. Beta-sheet and beta-barrel.
Biophys J. 1985 Aug;48(2):289-97. doi: 10.1016/S0006-3495(85)83782-6.
7
Rebinding and relaxation in the myoglobin pocket.
Biophys Chem. 1987 May 9;26(2-3):337-55. doi: 10.1016/0301-4622(87)80034-0.
9
Conformational substates in proteins.
Annu Rev Biophys Biophys Chem. 1988;17:451-79. doi: 10.1146/annurev.bb.17.060188.002315.
10
Site-selected fluorescence spectra of porphyrin derivatives of heme proteins.
Biochemistry. 1985 Dec 31;24(27):7931-5. doi: 10.1021/bi00348a013.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验