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蛋白质复合物的结构质谱分析能走多远?

How far can we go with structural mass spectrometry of protein complexes?

机构信息

Department of Biological Chemistry, Weizmann Institute of Science, Rehovot, Israel.

出版信息

J Am Soc Mass Spectrom. 2010 Apr;21(4):487-500. doi: 10.1016/j.jasms.2009.12.017. Epub 2010 Jan 4.

DOI:10.1016/j.jasms.2009.12.017
PMID:20116283
Abstract

Physical interactions between proteins and the formation of stable complexes form the basis of most biological functions. Therefore, a critical step toward understanding the integrated workings of the cell is to determine the structure of protein complexes, and reveal how their structural organization dictates function. Studying the three-dimensional organization of protein assemblies, however, represents a major challenge for structural biologists, due to the large size of the complexes, their heterogeneous composition, their flexibility, and their asymmetric structure. In the last decade, mass spectrometry has proven to be a valuable tool for analyzing such noncovalent complexes. Here, I illustrate the breadth of structural information that can be obtained from this approach, and the steps taken to elucidate the stoichiometry, topology, packing, dynamics, and shape of protein complexes. In addition, I illustrate the challenges that lie ahead, and the future directions toward which the field might be heading.

摘要

蛋白质之间的物理相互作用和稳定复合物的形成是大多数生物功能的基础。因此,理解细胞综合运作的关键步骤是确定蛋白质复合物的结构,并揭示其结构组织如何决定功能。然而,由于复合物的体积庞大、组成异质、结构灵活且不对称,研究蛋白质组装的三维组织对结构生物学家来说是一个重大挑战。在过去的十年中,质谱已被证明是分析这种非共价复合物的一种有价值的工具。在这里,我说明了可以从这种方法获得的结构信息的广度,以及为阐明蛋白质复合物的计量学、拓扑结构、包装、动态和形状而采取的步骤。此外,我还说明了未来面临的挑战和该领域可能的发展方向。

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How far can we go with structural mass spectrometry of protein complexes?蛋白质复合物的结构质谱分析能走多远?
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用于通过基质辅助激光解吸/电离串联飞行时间质谱和电喷雾电离LTQ-轨道阱质谱对蛋白质进行结构研究的异双功能同位素标记胺反应性光交联剂。
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Mass spectrometry of membrane transporters reveals subunit stoichiometry and interactions.膜转运蛋白的质谱分析揭示了亚基化学计量和相互作用。
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Molecular dissection of Alzheimer's disease neuropathology by depletion of serum amyloid P component.通过消耗血清淀粉样蛋白P成分对阿尔茨海默病神经病理学进行分子剖析。
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Symmetrical modularity of the COP9 signalosome complex suggests its multifunctionality.COP9信号体复合物的对称模块化表明其具有多功能性。
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Noncovalent protein tetramers and pentamers with "n" charges yield monomers with n/4 and n/5 charges.带有“n”个电荷的非共价蛋白质四聚体和五聚体产生带有n/4和n/5个电荷的单体。
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Chaperonin complexes monitored by ion mobility mass spectrometry.通过离子淌度质谱监测伴侣蛋白复合物。
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Quadrupole-time-of-flight mass spectrometer modified for higher-energy dissociation reduces protein assemblies to peptide fragments.经过改进以实现更高能量解离的四极杆-飞行时间质谱仪可将蛋白质聚集体降解为肽片段。
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Increasing charge while preserving noncovalent protein complexes for ESI-MS.在保留用于电喷雾电离质谱(ESI-MS)的非共价蛋白质复合物的同时增加电荷。
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