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东南太平洋埃希德娜鱼黄菌属,新属,新种,拟杆菌门的一个成员,从东南太平洋分离得到。

Ekhidna lutea gen. nov., sp. nov., a member of the phylum Bacteroidetes isolated from the South East Pacific Ocean.

机构信息

Université Pierre et Marie Curie - Paris 6, CNRS, UMR7621, F-66650 Banyuls-sur-Mer, France.

DSMZ - Deutsche Sammlung von Mikroorganismen und Zellkulturen, Inhoffenstraße 7B, 38124 Braunschweig, Germany.

出版信息

Int J Syst Evol Microbiol. 2010 Dec;60(Pt 12):2972-2978. doi: 10.1099/ijs.0.018804-0. Epub 2010 Jan 29.

Abstract

A novel aerobic, heterotrophic bacterium, designated BiosLi39(T), was isolated from the South East Pacific Ocean. Cells were Gram-negative gliding rods forming yellow colonies on marine agar. The isolate was oxidase-, catalase- and alkaline phosphatase-positive and β-galactosidase-negative. Strain BiosLi39(T) grew at 20-37°C (optimum 30°C), at pH7.0-9.0 (optimum pH8.0) and with 20-60 g NaCl l(-1) (optimum 30-50 g NaCl l(-1)). The fatty acids (>1 %) comprised iso-C(14 : 0), iso-C(15 : 1) G, iso-C(15 : 0), anteiso-C(15 : 0), C(15 : 1) G, C(15 : 0), iso-C(15 : 0) 2-OH, iso-C(16 : 1) G, iso-C(16 : 0), iso-C(16 : 0) 3-OH, iso-C(16 : 0) 2-OH, iso-C(17 : 0) 3-OH, C(17 : 0) 2-OH and three unidentified components with equivalent chain lengths of 17.87, 18.10 and 18.71. A significant proportion of the hydroxylated fatty acids are amide-linked. The lipid pattern indicated the presence of phosphatidylethanolamine, two unidentified aminolipids and three unidentified polar lipids. The strain contained menaquinone 7 as the sole respiratory lipoquinone and did not produce flexirubin-type pigments. The G+C content of the genomic DNA was 37.2 mol%. Comparative 16S rRNA gene sequence analysis indicated that strain BiosLi39(T) was distantly related to all of the representatives of the phylum Bacteroidetes. Its closest relative was Marinoscillum furvescens IFO 15994(T), with which it shared 92.5 % 16S rRNA gene sequence similarity. On the basis of genotypic, phenotypic and chemotaxonomic characteristics, we propose a novel genus and species, Ekhidna gen. nov., sp. nov., with type strain BiosLi39(T) (=DSM 19307(T) =CIP 109600(T) =OOB 398(T)).

摘要

一株新的好氧异养海洋细菌 BiosLi39(T)的分离与鉴定

从东南太平洋中分离到一株革兰氏阴性滑行杆菌,命名为 BiosLi39(T)。细胞为革兰氏阴性滑行杆,在海琼脂上形成黄色菌落。该菌氧化酶、过氧化氢酶和碱性磷酸酶阳性,β-半乳糖苷酶阴性。BiosLi39(T)在 20-37°C(最佳温度 30°C)、pH7.0-9.0(最佳 pH8.0)和 20-60 g NaCl l(-1)(最佳 30-50 g NaCl l(-1))下生长。脂肪酸(>1%)包括 iso-C(14:0)、iso-C(15:1) G、iso-C(15:0)、anteiso-C(15:0)、C(15:1) G、C(15:0)、iso-C(15:0) 2-OH、iso-C(16:1) G、iso-C(16:0)、iso-C(16:0) 3-OH、iso-C(16:0) 2-OH、iso-C(17:0) 3-OH、C(17:0) 2-OH 和三个未鉴定成分,其等效链长分别为 17.87、18.10 和 18.71。相当比例的羟基脂肪酸是酰胺连接的。脂质图谱表明存在磷脂酰乙醇胺、两种未鉴定的氨基脂和三种未鉴定的极性脂。该菌株含有menaquinone 7 作为唯一的呼吸类脂醌,不产生 flexirubin 型色素。基因组 DNA 的 G+C 含量为 37.2 mol%。比较 16S rRNA 基因序列分析表明,菌株 BiosLi39(T)与厚壁菌门的所有代表都有较远的关系。它最接近的亲缘关系是 Marinoscillum furvescens IFO 15994(T),两者 16S rRNA 基因序列相似性为 92.5%。基于基因型、表型和化学分类特征,我们提出了一个新属和新种,Ekhidna gen. nov.,sp. nov.,其模式种为 BiosLi39(T)(=DSM 19307(T) =CIP 109600(T) =OOB 398(T))。

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