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丹孔甲基杆菌(Methylobacterium dankookense),从饮用水中分离得到的一种新种。

Methylobacterium dankookense sp. nov., isolated from drinking water.

机构信息

Department of Microbiology, Dankook University, Cheonan 330-714, Republic of Korea.

出版信息

J Microbiol. 2009 Dec;47(6):716-20. doi: 10.1007/s12275-009-0126-6. Epub 2010 Feb 4.

DOI:10.1007/s12275-009-0126-6
PMID:20127465
Abstract

A pink-pigmented bacterium, designated SW08-7(T) was isolated from the drinking water of a water purifier. Cells were Gram-negative, rod-shaped, strictly aerobic, and non-spore-forming. It grew optimally at 25 degrees C, pH 6 approximately 7. Phylogenese analysis based on 16S rRNA gene sequence showed that strain SW08-7(T) belongs to the genus Methylobacterium. The highest 16S rRNA gene sequence similarities were found to Methylobacterium mesophilicum JCM 2829(T) (96.9%), Methylobacterium brachiatum B0021(T) (96.9%), Methylobacterium phyllosphaerae CBMB27(T) (96.6%), Methylobacterium radiotolerans JCM 2831(T) (96.6%), and Methylobacterium hispanicum GP34(T) (96.5%). DNA-DNA hybridization experiment revealed low-level (28.5%) of DNA-DNA relatedness between strain SW08-7(T) and Methylobacterium hispanicum. The genomic DNA G+C content was 68.9 mol% and the major isoprenoid quinone was Q-10. The major cellular fatty acid of strain SW08-7(T) was C(18:1) omega7c (79.8+/-2.1%). Results of phylogenetic, phenotypic, and biochemical analyses revealed that strain SW08-7(T) could be classified as representing a novel species of genus Methylobacterium, for which the name Methylobacterium dankookense sp. nov. is proposed. The type strain is SW08-7(T) (=KCTC 22512(T) =DSM 22415(1)).

摘要

一株粉红色着色的细菌,SW08-7(T),从饮水机的饮用水中分离出来。细胞革兰氏阴性,杆状,严格需氧,不产芽孢。最适生长温度为 25 摄氏度,pH 值为 6 左右 7. 根据 16S rRNA 基因序列进行的系统发育分析表明,菌株 SW08-7(T)属于甲基杆菌属。最高的 16S rRNA 基因序列相似度为中温甲基杆菌 JCM 2829(T) (96.9%),Brachiatum Methylobacterium B0021(T) (96.9%),Methylobacterium phyllosphaerae CBMB27(T) (96.6%),Methylobacterium radiotolerans JCM 2831(T) (96.6%),和 Methylobacterium hispanicum GP34(T) (96.5%)。DNA-DNA 杂交实验表明,菌株 SW08-7(T)与 Methylobacterium hispanicum 之间的 DNA-DNA 相关性较低(28.5%)。基因组 DNA G+C 含量为 68.9mol%,主要异戊二烯醌为 Q-10。菌株 SW08-7(T)的主要细胞脂肪酸为 C(18:1)ω7c (79.8+/-2.1%)。系统发育、表型和生化分析的结果表明,菌株 SW08-7(T)可归类为代表甲基杆菌属的一个新种,建议将其命名为 Methylobacterium dankookense sp. nov.。模式株为 SW08-7(T)=KCTC 22512(T)=DSM 22415(1)。

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本文引用的文献

1
Methylobacterium phyllosphaerae sp. nov., a pink-pigmented, facultative methylotroph from the phyllosphere of rice.水稻叶鞘甲基杆菌新种,一种来自水稻叶际的粉红色、兼性甲基营养菌。
Int J Syst Evol Microbiol. 2009 Jan;59(Pt 1):22-7. doi: 10.1099/ijs.0.001693-0.
2
Methylobacterium persicinum sp. nov., Methylobacterium komagatae sp. nov., Methylobacterium brachiatum sp. nov., Methylobacterium tardum sp. nov. and Methylobacterium gregans sp. nov., isolated from freshwater.新种桃金娘甲基杆菌、新种小泽甲基杆菌、新种臂状甲基杆菌、新种迟缓甲基杆菌和新种群居甲基杆菌,从淡水中分离得到。
Int J Syst Evol Microbiol. 2008 May;58(Pt 5):1134-41. doi: 10.1099/ijs.0.65583-0.
3
不同农村卫生中心饮用水样本中的机会性病原体鉴定及其对人类的临床影响。
Biomed Res Int. 2013;2013:348250. doi: 10.1155/2013/348250. Epub 2013 Jun 3.
4
Arenimonas aquatica [corrected] sp. nov., a member of the gammaproteobacterium, isolated from a freshwater reservoir.水生阿伦氏菌[更正],一种γ-变形菌纲的成员,从淡水水库中分离得到。
J Microbiol. 2012 Apr;50(2):354-8. doi: 10.1007/s12275-012-1301-8. Epub 2012 Apr 27.
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Flavobacterium koreense sp. nov., Flavobacterium chungnamense sp. nov., and Flavobacterium cheonanense sp. nov., isolated from a freshwater reservoir.韩国鞘氨醇杆菌新种、忠南鞘氨醇杆菌新种和天安鞘氨醇杆菌新种,从淡水水库中分离得到。
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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
MEGA4:分子进化遗传学分析(MEGA)软件版本4.0。
Mol Biol Evol. 2007 Aug;24(8):1596-9. doi: 10.1093/molbev/msm092. Epub 2007 May 7.
4
Glaciecola nitratireducens sp. nov., isolated from seawater.新种嗜硝酸盐冰川菌,从海水中分离得到。
Int J Syst Evol Microbiol. 2006 Sep;56(Pt 9):2185-2188. doi: 10.1099/ijs.0.64330-0.
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Methylobacterium adhaesivum sp. nov., a methylotrophic bacterium isolated from drinking water.嗜黏甲基杆菌新种,一种从饮用水中分离出的甲基营养型细菌。
Int J Syst Evol Microbiol. 2006 Feb;56(Pt 2):339-342. doi: 10.1099/ijs.0.63966-0.
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Methylobacterium variabile sp. nov., a methylotrophic bacterium isolated from an aquatic environment.可变甲基杆菌新种,一种从水生环境中分离出的甲基营养型细菌。
Int J Syst Evol Microbiol. 2005 Jul;55(Pt 4):1429-1433. doi: 10.1099/ijs.0.63597-0.
7
Methylobacterium hispanicum sp. nov. and Methylobacterium aquaticum sp. nov., isolated from drinking water.西班牙甲基杆菌新种和水生甲基杆菌新种,从饮用水中分离得到。
Int J Syst Evol Microbiol. 2005 Jan;55(Pt 1):281-287. doi: 10.1099/ijs.0.63319-0.
8
Methylobacterium nodulans sp. nov., for a group of aerobic, facultatively methylotrophic, legume root-nodule-forming and nitrogen-fixing bacteria.新种结节甲基杆菌,用于一组需氧、兼性甲基营养、能形成豆科植物根瘤并固氮的细菌。
Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2269-2273. doi: 10.1099/ijs.0.02902-0.
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Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoides x nigra DN34).杨树甲基杆菌新种,一种从杨树(美洲黑杨×欧洲黑杨DN34)中分离出的新型需氧、粉红色色素、兼性甲基营养、利用甲烷的细菌。
Int J Syst Evol Microbiol. 2004 Jul;54(Pt 4):1191-1196. doi: 10.1099/ijs.0.02796-0.