Baik Keun Sik, Park Yoon-Dong, Seong Chi Nam, Kim Eun Mi, Bae Kyung Sook, Chun Jongsik
Department of Biology, College of Natural Sciences, Sunchon National University, Sunchon 540-742, Republic of Korea.
School of Biological Sciences and Institute of Microbiology, Seoul National University, NS70, 56-1 Shillim-dong, Kwanak-gu, Seoul 151-742, Republic of Korea.
Int J Syst Evol Microbiol. 2006 Sep;56(Pt 9):2185-2188. doi: 10.1099/ijs.0.64330-0.
A marine bacterial strain, FR1064(T), was isolated from a surface seawater sample collected off Jeju Island, South Korea. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolate belonged to the Gammaproteobacteria and was related to the genus Glaciecola with 97.6 % sequence similarity to Glaciecola pallidula, its nearest phylogenetic neighbour. DNA-DNA relatedness between strain FR1064(T) and G. pallidula ACAM 615(T) was 55 %. Cells of the novel isolate were Gram-negative, aerobic, rod-shaped, motile and halophilic, with an optimum sea salts concentration of 4-7 %. The major fatty acids were straight-chain saturated (C(16 : 0)), summed feature 3 and monounsaturated fatty acid C(18 : 1). The DNA G+C content was 44 mol%. Several phenotypic characteristics differentiated the novel isolate from all previously described members of the genus Glaciecola. The polyphasic data obtained in this study clearly demonstrate that strain FR1064(T) represents a novel species of the genus Glaciecola. The name Glaciecola nitratireducens sp. nov. is therefore proposed, with strain FR1064(T) (=KCTC 12276(T)=JCM 12485(T)) as the type strain.
从韩国济州岛附近采集的表层海水样本中分离出一株海洋细菌菌株FR1064(T)。基于16S rRNA基因序列的系统发育分析表明,该分离株属于γ-变形菌纲,与嗜冷杆菌属相关,与最接近的系统发育邻种苍白嗜冷杆菌的序列相似性为97.6%。菌株FR1064(T)与苍白嗜冷杆菌ACAM 615(T)之间的DNA-DNA相关性为55%。该新分离株的细胞为革兰氏阴性、需氧、杆状、具运动性且嗜盐,最适海盐浓度为4-7%。主要脂肪酸为直链饱和脂肪酸(C(16 : 0))、特征性总和3以及单不饱和脂肪酸C(18 : 1)。DNA G+C含量为44 mol%。几个表型特征使该新分离株与先前描述的嗜冷杆菌属所有成员区分开来。本研究获得的多相数据清楚地表明,菌株FR1064(T)代表嗜冷杆菌属的一个新物种。因此,提出新种名称嗜盐嗜冷杆菌(Glaciecola nitratireducens sp. nov.),以菌株FR1064(T)(=KCTC 12276(T)=JCM 12,485(T))作为模式菌株。