拟南芥基因组测序和分析。

Genome sequencing and analysis of the model grass Brachypodium distachyon.

机构信息

USDA-ARS Western Regional Research Center, Albany, California 94710, USA.

出版信息

Nature. 2010 Feb 11;463(7282):763-8. doi: 10.1038/nature08747.

Abstract

Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the Pooideae subfamily to be sequenced. Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome evolution across a broad diversity of the grasses, and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat. The high-quality genome sequence, coupled with ease of cultivation and transformation, small size and rapid life cycle, will help Brachypodium reach its potential as an important model system for developing new energy and food crops.

摘要

三个禾本科亚科,即画眉草亚科、黍亚科和禾亚科,为人类提供了大部分的营养物质,并且有望成为可再生能源的主要来源。在这里,我们描述了野生草属植物短柄草(Brachypodium distachyon)的基因组序列。据我们所知,这是第一个被测序的禾本科禾亚科成员。短柄草、水稻和高粱基因组的比较显示了广泛的禾本科植物基因组进化的精确历史,并为分析小麦等重要经济禾本科植物的大型基因组建立了一个模板。高质量的基因组序列,加上易于栽培和转化、体型小和快速的生命周期,将有助于短柄草发挥其作为开发新能源和粮食作物的重要模式系统的潜力。

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