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基于患病子代的家系研究中基因-环境交互作用的双重稳健检验。

A doubly robust test for gene-environment interaction in family-based studies of affected offspring.

机构信息

Department of Data Analysis, Ghent University, Henri Dunantlaan 1, Ghent, Belgium.

出版信息

Biostatistics. 2010 Apr;11(2):213-25. doi: 10.1093/biostatistics/kxp061. Epub 2010 Feb 12.

DOI:10.1093/biostatistics/kxp061
PMID:20154305
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2830581/
Abstract

We develop a locally efficient test for (multiplicative) gene-environment interaction in family studies that collect genotypic information and environmental exposures for affected offspring along with genotypic information for their parents or relatives. The proposed test does not require modeling the effects of environmental exposures and is doubly robust in the sense of being valid if either a model for the main genetic effect holds or a model for the expected environmental exposure (given the offspring affection status and parental mating types) but not necessarily both. It extends the FBAT-I to allow for missing parental mating types and families of arbitrary size. Simulation studies and the analysis of an Alzheimer's disease study confirm the adequate performance of the proposed test.

摘要

我们开发了一种在收集受影响后代的基因型信息和环境暴露情况以及其父母或亲属的基因型信息的家族研究中针对(乘法)基因-环境交互作用的局部有效的检验方法。该检验方法不需要对环境暴露的影响进行建模,并且在以下两种情况下是双重稳健的:一种是主要遗传效应的模型成立,另一种是预期环境暴露的模型(根据后代的患病状况和父母的交配类型),而不一定需要同时满足这两种情况。它扩展了 FBAT-I 以允许缺失的父母交配类型和任意大小的家庭。模拟研究和阿尔茨海默病研究的分析证实了所提出检验方法的良好性能。

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本文引用的文献

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Multiply robust inference for statistical interactions.统计交互作用的多重稳健推断。
J Am Stat Assoc. 2008 Dec 1;103(484):1693-1704. doi: 10.1198/016214508000001084.
2
On the distinction between interaction and effect modification.关于交互作用和效应修饰的区别。
Epidemiology. 2009 Nov;20(6):863-71. doi: 10.1097/EDE.0b013e3181ba333c.
3
Gene-environment interaction tests for dichotomous traits in trios and sibships.在三亲子代和同胞群组中对二项性状的基因-环境交互作用检验。
Genet Epidemiol. 2009 Dec;33(8):691-9. doi: 10.1002/gepi.20421.
4
Likelihood-based association analysis for nuclear families and unrelated subjects with missing genotype data.针对有缺失基因型数据的核心家庭和无关个体的基于似然性的关联分析。
Hum Hered. 2008;66(2):87-98. doi: 10.1159/000119108. Epub 2008 Mar 31.
5
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Biometrics. 2008 Jun;64(2):458-67. doi: 10.1111/j.1541-0420.2007.00925.x. Epub 2007 Oct 25.
6
Exploiting gene-environment independence in family-based case-control studies: increased power for detecting associations, interactions and joint effects.在基于家系的病例对照研究中利用基因-环境独立性:增强检测关联、相互作用和联合效应的效能。
Genet Epidemiol. 2005 Feb;28(2):138-56. doi: 10.1002/gepi.20049.
7
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8
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9
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